Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
CDH4P55283 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDH4P55283 DDX10P1-201ENST00000448545 1933 ntBASIC2.58□□□□□ -2
CDH4P55283 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDH4P55283 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CDH4P55283 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CDH4P55283 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CDH4P55283 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.57□□□□□ -2
CDH4P55283 AC022336.2-201ENST00000568966 2538 ntBASIC2.57□□□□□ -2
CDH4P55283 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
CDH4P55283 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
CDH4P55283 RNU6-560P-201ENST00000364007 108 ntBASIC2.57□□□□□ -2
CDH4P55283 RNU6-413P-201ENST00000384115 107 ntBASIC2.57□□□□□ -2
CDH4P55283 MIR1284-201ENST00000408337 120 ntBASIC2.57□□□□□ -2
CDH4P55283 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDH4P55283 RNU6-516P-201ENST00000411381 104 ntBASIC2.57□□□□□ -2
CDH4P55283 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.57□□□□□ -2
CDH4P55283 AL358075.3-201ENST00000426289 226 ntBASIC2.57□□□□□ -2
CDH4P55283 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.57□□□□□ -2
CDH4P55283 FGF7P5-201ENST00000441829 291 ntBASIC2.57□□□□□ -2
CDH4P55283 MEMO1P3-201ENST00000459811 302 ntBASIC2.57□□□□□ -2
CDH4P55283 AC104563.1-201ENST00000476147 376 ntBASIC2.57□□□□□ -2
CDH4P55283 RPS15AP34-201ENST00000487776 387 ntBASIC2.57□□□□□ -2
CDH4P55283 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.57□□□□□ -2
CDH4P55283 SUMO2P6-201ENST00000505273 288 ntBASIC2.57□□□□□ -2
CDH4P55283 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.57□□□□□ -2
CDH4P55283 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
CDH4P55283 RPL7P20-201ENST00000520308 745 ntBASIC2.57□□□□□ -2
CDH4P55283 HMGN1P28-201ENST00000521340 364 ntBASIC2.57□□□□□ -2
CDH4P55283 CKS1BP7-201ENST00000522230 235 ntBASIC2.57□□□□□ -2
CDH4P55283 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.57□□□□□ -2
CDH4P55283 AC009097.3-201ENST00000563557 1018 ntBASIC2.57□□□□□ -2
CDH4P55283 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.57□□□□□ -2
CDH4P55283 OR1M4P-201ENST00000589199 287 ntBASIC2.57□□□□□ -2
CDH4P55283 AC024560.3-201ENST00000608482 349 ntBASIC2.57□□□□□ -2
CDH4P55283 AF129408.1-201ENST00000608767 431 ntBASIC2.57□□□□□ -2
CDH4P55283 AL121895.2-201ENST00000619558 447 ntBASIC2.57□□□□□ -2
CDH4P55283 AC009268.2-201ENST00000621925 457 ntBASIC2.57□□□□□ -2
CDH4P55283 AC103798.2-201ENST00000624292 632 ntBASIC2.57□□□□□ -2
CDH4P55283 AC019226.1-201ENST00000625666 515 ntBASIC2.57□□□□□ -2
CDH4P55283 AC243829.7-201ENST00000633081 225 ntBASIC2.57□□□□□ -2
CDH4P55283 AL138713.1-201ENST00000624026 2130 ntBASIC2.57□□□□□ -2
CDH4P55283 CR848007.1-201ENST00000442354 1699 ntBASIC2.57□□□□□ -2
CDH4P55283 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH4P55283 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH4P55283 SET-203ENST00000372688 801 ntTSL 2 BASIC2.56□□□□□ -2
CDH4P55283 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
CDH4P55283 MIR518C-201ENST00000384822 101 ntBASIC2.56□□□□□ -2
CDH4P55283 AL109755.1-201ENST00000401791 649 ntBASIC2.56□□□□□ -2
CDH4P55283 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.56□□□□□ -2
CDH4P55283 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AC092047.1-201ENST00000424997 240 ntBASIC2.56□□□□□ -2
CDH4P55283 USP9YP11-201ENST00000427537 717 ntBASIC2.56□□□□□ -2
CDH4P55283 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
CDH4P55283 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
CDH4P55283 AC007327.1-201ENST00000447461 264 ntBASIC2.56□□□□□ -2
CDH4P55283 ATG12P2-201ENST00000456830 416 ntBASIC2.56□□□□□ -2
CDH4P55283 HMGB1P36-201ENST00000487709 576 ntBASIC2.56□□□□□ -2
CDH4P55283 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
CDH4P55283 AC021451.1-201ENST00000523498 1129 ntBASIC2.56□□□□□ -2
CDH4P55283 AP000889.1-201ENST00000530968 660 ntBASIC2.56□□□□□ -2
CDH4P55283 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.56□□□□□ -2
CDH4P55283 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.56□□□□□ -2
CDH4P55283 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
CDH4P55283 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.56□□□□□ -2
CDH4P55283 AL391261.3-201ENST00000557194 520 ntBASIC2.56□□□□□ -2
CDH4P55283 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.56□□□□□ -2
CDH4P55283 AC087465.1-201ENST00000560574 245 ntBASIC2.56□□□□□ -2
CDH4P55283 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.56□□□□□ -2
CDH4P55283 OR4K7P-201ENST00000580232 945 ntBASIC2.56□□□□□ -2
CDH4P55283 AC090616.3-201ENST00000582184 217 ntBASIC2.56□□□□□ -2
CDH4P55283 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
CDH4P55283 HMGN2P15-201ENST00000585707 270 ntBASIC2.56□□□□□ -2
CDH4P55283 AC002545.1-201ENST00000592511 181 ntBASIC2.56□□□□□ -2
CDH4P55283 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
CDH4P55283 AC007621.1-201ENST00000604544 437 ntBASIC2.56□□□□□ -2
CDH4P55283 AL161729.4-201ENST00000604650 476 ntBASIC2.56□□□□□ -2
CDH4P55283 AC131235.4-201ENST00000609288 620 ntBASIC2.56□□□□□ -2
CDH4P55283 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH4P55283 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
CDH4P55283 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CDH4P55283 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CDH4P55283 RNU6-289P-201ENST00000364093 107 ntBASIC2.55□□□□□ -2
CDH4P55283 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CDH4P55283 RNU6-217P-201ENST00000384164 104 ntBASIC2.55□□□□□ -2
CDH4P55283 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
CDH4P55283 RN7SKP140-201ENST00000411196 284 ntBASIC2.55□□□□□ -2
CDH4P55283 AL953862.1-201ENST00000423016 168 ntBASIC2.55□□□□□ -2
CDH4P55283 ZNF863P-201ENST00000426746 417 ntBASIC2.55□□□□□ -2
CDH4P55283 NANOGP2-201ENST00000435391 727 ntBASIC2.55□□□□□ -2
CDH4P55283 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.55□□□□□ -2
CDH4P55283 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms