Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCNKAP51800 OR5H6-203ENST00000642105 978 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCNKAP51800 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLCNKAP51800 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLCNKAP51800 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CLCNKAP51800 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLCNKAP51800 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLCNKAP51800 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLCNKAP51800 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLCNKAP51800 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.86
CLCNKAP51800 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLCNKAP51800 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
CLCNKAP51800 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 RNU6-282P-201ENST00000365357 103 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 RNY3P13-201ENST00000365542 102 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 RNU6-1074P-201ENST00000383995 104 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 RNU6-637P-201ENST00000384050 107 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCNKAP51800 EI24P2-201ENST00000397776 1076 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 GSTA9P-201ENST00000406231 611 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AL591034.1-201ENST00000407447 340 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 RPS3AP24-201ENST00000407896 734 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 RNU2-8P-201ENST00000410727 190 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC017079.2-201ENST00000416102 485 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 MTND3P17-201ENST00000416968 344 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCNKAP51800 SNRPEP4-201ENST00000435815 279 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.4□□□□□ -1.87
CLCNKAP51800 PRSS3P4-201ENST00000453323 162 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 MTND1P12-201ENST00000455231 147 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 C1DP4-201ENST00000455429 424 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 RPL7P23-201ENST00000493874 747 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 KCTD9P5-201ENST00000504141 1170 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC108078.1-201ENST00000508073 725 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC105914.1-201ENST00000511798 226 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC022483.1-201ENST00000514020 567 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 RNU6-506P-201ENST00000516553 94 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 Vault.3-201ENST00000516676 95 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC103783.1-201ENST00000520506 373 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.4□□□□□ -1.87
CLCNKAP51800 DEFB108D-201ENST00000527787 222 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC018630.1-201ENST00000541376 925 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC125611.2-201ENST00000551907 647 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCNKAP51800 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCNKAP51800 BNIP3P22-201ENST00000593399 556 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC006557.5-201ENST00000603126 811 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AF250324.2-201ENST00000608299 610 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC004908.2-201ENST00000609090 574 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 uc_338.12-201ENST00000616344 181 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AL136313.1-201ENST00000624804 202 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 AC118273.1-201ENST00000525324 3006 ntBASIC3.4□□□□□ -1.87
CLCNKAP51800 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CLCNKAP51800 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCNKAP51800 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCNKAP51800 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CLCNKAP51800 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLCNKAP51800 SNORA20.2-201ENST00000383922 131 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 RNU6-432P-201ENST00000384196 109 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 HMGN1P24-201ENST00000412282 298 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 MTND1P21-201ENST00000412991 285 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AC099677.1-201ENST00000420575 175 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 PIGFP2-201ENST00000421400 651 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC006946.1-201ENST00000429106 328 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AC093392.2-201ENST00000450682 337 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCNKAP51800 snoU13.22-201ENST00000459428 104 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 RPL7P49-201ENST00000471402 708 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CLCNKAP51800 ARL2BPP6-201ENST00000512757 439 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC114797.1-201ENST00000514003 728 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC026801.2-201ENST00000515352 425 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AC022616.3-201ENST00000523940 148 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 DEFB108A-201ENST00000530110 222 ntBASIC3.39□□□□□ -1.87
CLCNKAP51800 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCNKAP51800 AC027807.1-201ENST00000559921 996 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms