Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC090615.1-201ENST00000577519 154 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.76□□□□□ -1.97
HCFC1P51610 YWHAQP7-201ENST00000603536 658 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 RNA5SP108-201ENST00000605921 117 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC007684.1-201ENST00000609671 477 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC092794.1-201ENST00000612734 582 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC073968.1-201ENST00000618594 637 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AL158209.2-201ENST00000619266 216 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HCFC1P51610 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.76□□□□□ -1.97
HCFC1P51610 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
HCFC1P51610 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HCFC1P51610 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HCFC1P51610 RNU5A-6P-201ENST00000384136 116 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 U3.20-201ENST00000390909 217 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 RNU6-712P-201ENST00000410558 100 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 RNU2-8P-201ENST00000410727 190 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 NUP35P1-201ENST00000422734 947 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC073464.1-201ENST00000429823 534 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.76□□□□□ -1.97
HCFC1P51610 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.76□□□□□ -1.97
HCFC1P51610 RPL23AP22-201ENST00000437556 453 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC073614.1-201ENST00000438690 650 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HCFC1P51610 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC244505.5-201ENST00000443639 207 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 SNORD108-201ENST00000459332 71 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.76□□□□□ -1.97
HCFC1P51610 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HCFC1P51610 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.76□□□□□ -1.97
HCFC1P51610 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC080078.2-201ENST00000603766 501 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC004908.2-201ENST00000609090 574 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC108747.1-201ENST00000609508 535 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AC008250.2-201ENST00000615261 205 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 AL590099.1-201ENST00000615276 138 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.76□□□□□ -1.97
HCFC1P51610 AC079597.1-201ENST00000624306 508 ntBASIC2.76□□□□□ -1.97
HCFC1P51610 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
HCFC1P51610 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.76□□□□□ -1.97
HCFC1P51610 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HCFC1P51610 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.75□□□□□ -1.97
HCFC1P51610 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 AC004944.1-201ENST00000517807 3059 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 Y_RNA.402-201ENST00000383972 102 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 TXNP7-201ENST00000406296 293 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 RNA5SP293-201ENST00000410527 113 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 Y_RNA.608-201ENST00000410647 95 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 MTND1P21-201ENST00000412991 285 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC092447.6-201ENST00000414578 210 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 PIGFP2-201ENST00000421400 651 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.75□□□□□ -1.97
HCFC1P51610 RPL7P54-201ENST00000438336 674 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 RPL22P17-201ENST00000438729 315 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AL049734.2-201ENST00000441066 616 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 HMGB3P30-201ENST00000457863 606 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 AC126182.1-201ENST00000478134 357 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 RPL9P33-201ENST00000484311 566 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 SNORA64.4-201ENST00000516632 81 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.75□□□□□ -1.97
HCFC1P51610 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC125611.2-201ENST00000551907 647 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 EIF1P4-201ENST00000572664 335 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 UBE2L4-201ENST00000587688 464 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AL031176.1-201ENST00000604554 466 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 RBM11P1-201ENST00000604951 799 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC091834.1-201ENST00000614543 472 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AL158801.5-201ENST00000623123 465 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AL157786.1-207ENST00000627771 695 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 AL353746.1-201ENST00000566293 6881 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 FAM35BP-202ENST00000497389 3337 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 U3.15-201ENST00000365398 212 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms