Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC091304.6-201ENST00000619761 202 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AL356473.1-201ENST00000406203 1408 ntBASIC1.22□□□□□ -2.21
SNCAP37840 AC025263.3-201ENST00000622965 1396 ntBASIC1.21□□□□□ -2.21
SNCAP37840 NUP58P1-201ENST00000502546 1738 ntBASIC1.21□□□□□ -2.22
SNCAP37840 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.21□□□□□ -2.22
SNCAP37840 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SNCAP37840 U8.13-201ENST00000390842 128 ntBASIC1.21□□□□□ -2.22
SNCAP37840 RNU6-1197P-201ENST00000391183 107 ntBASIC1.21□□□□□ -2.22
SNCAP37840 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.21□□□□□ -2.22
SNCAP37840 AC093106.2-201ENST00000428212 385 ntBASIC1.21□□□□□ -2.22
SNCAP37840 YWHAZP8-201ENST00000436935 731 ntBASIC1.21□□□□□ -2.22
SNCAP37840 RPL23AP6-201ENST00000446637 472 ntBASIC1.21□□□□□ -2.22
SNCAP37840 UBE2V2P4-201ENST00000447495 259 ntBASIC1.21□□□□□ -2.22
SNCAP37840 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.21□□□□□ -2.22
SNCAP37840 RPL30P5-201ENST00000494923 336 ntBASIC1.21□□□□□ -2.22
SNCAP37840 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.21□□□□□ -2.22
SNCAP37840 AC098862.1-201ENST00000504991 413 ntBASIC1.21□□□□□ -2.22
SNCAP37840 SCARNA17.1-201ENST00000516211 143 ntBASIC1.21□□□□□ -2.22
SNCAP37840 SCARNA17.2-201ENST00000516334 143 ntBASIC1.21□□□□□ -2.22
SNCAP37840 RNA5SP61-201ENST00000516453 100 ntBASIC1.21□□□□□ -2.22
SNCAP37840 RNU6-295P-201ENST00000516901 104 ntBASIC1.21□□□□□ -2.22
SNCAP37840 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.21□□□□□ -2.22
SNCAP37840 AK6P1-201ENST00000540219 478 ntBASIC1.21□□□□□ -2.22
SNCAP37840 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.21□□□□□ -2.22
SNCAP37840 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.21□□□□□ -2.22
SNCAP37840 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.21□□□□□ -2.22
SNCAP37840 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.21□□□□□ -2.22
SNCAP37840 AC011494.1-201ENST00000596454 237 ntBASIC1.21□□□□□ -2.22
SNCAP37840 AL022099.1-201ENST00000604551 712 ntBASIC1.21□□□□□ -2.22
SNCAP37840 VN1R9P-201ENST00000614184 867 ntBASIC1.21□□□□□ -2.22
SNCAP37840 SCARNA17.4-201ENST00000614296 143 ntBASIC1.21□□□□□ -2.22
SNCAP37840 AC011330.2-201ENST00000621680 635 ntBASIC1.21□□□□□ -2.22
SNCAP37840 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SNCAP37840 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
SNCAP37840 AC002543.1-201ENST00000299783 1954 ntBASIC1.2□□□□□ -2.22
SNCAP37840 RNU6-1159P-201ENST00000362933 107 ntBASIC1.2□□□□□ -2.22
SNCAP37840 SNRPEP2-201ENST00000397592 279 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
SNCAP37840 AL009174.1-201ENST00000426577 416 ntBASIC1.2□□□□□ -2.22
SNCAP37840 SDAD1P3-201ENST00000427380 333 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
SNCAP37840 HMGB3P12-201ENST00000438745 556 ntBASIC1.2□□□□□ -2.22
SNCAP37840 HSPE1P24-201ENST00000450782 238 ntBASIC1.2□□□□□ -2.22
SNCAP37840 RPL21P134-201ENST00000453468 483 ntBASIC1.2□□□□□ -2.22
SNCAP37840 USP9YP10-201ENST00000454868 628 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AC025181.1-201ENST00000477507 416 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AC027575.1-201ENST00000481064 460 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AC107032.1-201ENST00000485945 480 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.2□□□□□ -2.22
SNCAP37840 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.2□□□□□ -2.22
SNCAP37840 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.2□□□□□ -2.22
SNCAP37840 MIR4255-201ENST00000579351 72 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.2□□□□□ -2.22
SNCAP37840 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SNCAP37840 AL355877.2-201ENST00000603670 358 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AC013468.1-201ENST00000608680 598 ntBASIC1.2□□□□□ -2.22
SNCAP37840 MIR6845-201ENST00000613182 61 ntBASIC1.2□□□□□ -2.22
SNCAP37840 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.2□□□□□ -2.22
SNCAP37840 MTND2P41-201ENST00000637599 773 ntBASIC1.2□□□□□ -2.22
SNCAP37840 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SNCAP37840 SNORA67.6-201ENST00000391093 99 ntBASIC1.19□□□□□ -2.22
SNCAP37840 RNA5SP450-201ENST00000411206 102 ntBASIC1.19□□□□□ -2.22
SNCAP37840 RPS3AP9-201ENST00000417027 792 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.19□□□□□ -2.22
SNCAP37840 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.19□□□□□ -2.22
SNCAP37840 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.19□□□□□ -2.22
SNCAP37840 AC118469.1-201ENST00000442943 488 ntBASIC1.19□□□□□ -2.22
SNCAP37840 RPL32P28-201ENST00000443577 397 ntBASIC1.19□□□□□ -2.22
SNCAP37840 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.19□□□□□ -2.22
SNCAP37840 RPS29P23-201ENST00000458635 123 ntBASIC1.19□□□□□ -2.22
SNCAP37840 RNU6-420P-201ENST00000458780 107 ntBASIC1.19□□□□□ -2.22
SNCAP37840 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SNCAP37840 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 AC112518.2-201ENST00000508565 425 ntBASIC1.19□□□□□ -2.22
SNCAP37840 TPT1P8-201ENST00000510120 555 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 AC104057.1-201ENST00000515547 497 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AC118273.2-201ENST00000532092 465 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.19□□□□□ -2.22
SNCAP37840 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 AC084033.1-201ENST00000550830 633 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.19□□□□□ -2.22
SNCAP37840 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.19□□□□□ -2.22
SNCAP37840 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.19□□□□□ -2.22
SNCAP37840 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.19□□□□□ -2.22
SNCAP37840 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.19□□□□□ -2.22
SNCAP37840 AP000254.1-201ENST00000609934 520 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.19□□□□□ -2.22
SNCAP37840 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.19□□□□□ -2.22
SNCAP37840 AC026634.1-201ENST00000634369 198 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AC111188.2-201ENST00000529697 1387 ntBASIC1.19□□□□□ -2.22
SNCAP37840 AL356292.1-201ENST00000283110 373 ntBASIC1.18□□□□□ -2.22
SNCAP37840 RPL17P50-201ENST00000396131 546 ntBASIC1.18□□□□□ -2.22
SNCAP37840 SSXP10-201ENST00000402595 565 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AL158823.1-201ENST00000418441 478 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AL109913.1-201ENST00000421173 514 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms