Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MTND4LP3-201ENST00000468320 276 ntBASIC2.88□□□□□ -1.95
RFC4P35249 LINC00888-204ENST00000487386 421 ntBASIC2.88□□□□□ -1.95
RFC4P35249 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.88□□□□□ -1.95
RFC4P35249 MTCYBP16-201ENST00000509187 1129 ntBASIC2.88□□□□□ -1.95
RFC4P35249 AC098799.2-201ENST00000509466 868 ntBASIC2.88□□□□□ -1.95
RFC4P35249 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.88□□□□□ -1.95
RFC4P35249 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.88□□□□□ -1.95
RFC4P35249 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.88□□□□□ -1.95
RFC4P35249 RN7SKP40-201ENST00000517211 242 ntBASIC2.88□□□□□ -1.95
RFC4P35249 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.88□□□□□ -1.95
RFC4P35249 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFC4P35249 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.88□□□□□ -1.95
RFC4P35249 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFC4P35249 AC125611.1-201ENST00000549563 229 ntBASIC2.88□□□□□ -1.95
RFC4P35249 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.88□□□□□ -1.95
RFC4P35249 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.88□□□□□ -1.95
RFC4P35249 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.88□□□□□ -1.95
RFC4P35249 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.88□□□□□ -1.95
RFC4P35249 AL161734.1-201ENST00000609720 557 ntBASIC2.88□□□□□ -1.95
RFC4P35249 BX664608.1-201ENST00000610519 487 ntBASIC2.88□□□□□ -1.95
RFC4P35249 AC024257.5-201ENST00000612739 531 ntBASIC2.88□□□□□ -1.95
RFC4P35249 RNU6-216P-201ENST00000363282 104 ntBASIC2.87□□□□□ -1.95
RFC4P35249 SNORA11.4-201ENST00000408823 129 ntBASIC2.87□□□□□ -1.95
RFC4P35249 RNU2-47P-201ENST00000410649 186 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.87□□□□□ -1.95
RFC4P35249 AC129850.1-201ENST00000436203 508 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC018634.1-201ENST00000437554 401 ntBASIC2.87□□□□□ -1.95
RFC4P35249 MUPP-201ENST00000438111 566 ntBASIC2.87□□□□□ -1.95
RFC4P35249 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.87□□□□□ -1.95
RFC4P35249 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RFC4P35249 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.87□□□□□ -1.95
RFC4P35249 USP9YP34-201ENST00000453983 808 ntBASIC2.87□□□□□ -1.95
RFC4P35249 MTCO3P11-201ENST00000455103 774 ntBASIC2.87□□□□□ -1.95
RFC4P35249 RPL31P60-201ENST00000478450 367 ntBASIC2.87□□□□□ -1.95
RFC4P35249 RPL23AP70-201ENST00000483361 460 ntBASIC2.87□□□□□ -1.95
RFC4P35249 RPS15AP34-201ENST00000487776 387 ntBASIC2.87□□□□□ -1.95
RFC4P35249 RPL30P5-201ENST00000494923 336 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.87□□□□□ -1.95
RFC4P35249 MTND4P2-201ENST00000507767 1203 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC113347.3-201ENST00000509113 148 ntBASIC2.87□□□□□ -1.95
RFC4P35249 XKRY-201ENST00000510392 1100 ntBASIC2.87□□□□□ -1.95
RFC4P35249 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.87□□□□□ -1.95
RFC4P35249 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.87□□□□□ -1.95
RFC4P35249 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.87□□□□□ -1.95
RFC4P35249 AC105137.2-201ENST00000569073 466 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC103810.1-201ENST00000579873 453 ntBASIC2.87□□□□□ -1.95
RFC4P35249 BNIP3P24-201ENST00000593398 557 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC009318.2-201ENST00000610917 651 ntBASIC2.87□□□□□ -1.95
RFC4P35249 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC104763.3-201ENST00000613765 618 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AC023158.2-201ENST00000614876 543 ntBASIC2.87□□□□□ -1.95
RFC4P35249 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.87□□□□□ -1.95
RFC4P35249 AL445984.1-201ENST00000637834 659 ntBASIC2.87□□□□□ -1.95
RFC4P35249 OR4G11P-202ENST00000642116 1414 ntBASIC2.86□□□□□ -1.95
RFC4P35249 MIR506-201ENST00000384998 124 ntBASIC2.86□□□□□ -1.95
RFC4P35249 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.86□□□□□ -1.95
RFC4P35249 RPL7P37-201ENST00000425095 738 ntBASIC2.86□□□□□ -1.95
RFC4P35249 NANOGP2-201ENST00000435391 727 ntBASIC2.86□□□□□ -1.95
RFC4P35249 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFC4P35249 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.86□□□□□ -1.95
RFC4P35249 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.86□□□□□ -1.95
RFC4P35249 RPL23AP76-201ENST00000441860 458 ntBASIC2.86□□□□□ -1.95
RFC4P35249 RPL39P40-201ENST00000445481 146 ntBASIC2.86□□□□□ -1.95
RFC4P35249 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.86□□□□□ -1.95
RFC4P35249 RPS15AP17-201ENST00000470598 390 ntBASIC2.86□□□□□ -1.95
RFC4P35249 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.86□□□□□ -1.95
RFC4P35249 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.86□□□□□ -1.95
RFC4P35249 MTCYBP17-201ENST00000503579 789 ntBASIC2.86□□□□□ -1.95
RFC4P35249 TMEM251P1-201ENST00000503717 318 ntBASIC2.86□□□□□ -1.95
RFC4P35249 HMGB1P28-201ENST00000507778 552 ntBASIC2.86□□□□□ -1.95
RFC4P35249 OR5BM1P-201ENST00000512021 366 ntBASIC2.86□□□□□ -1.95
RFC4P35249 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.86□□□□□ -1.95
RFC4P35249 AC008837.2-201ENST00000513076 418 ntBASIC2.86□□□□□ -1.95
RFC4P35249 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
RFC4P35249 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.86□□□□□ -1.95
RFC4P35249 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.86□□□□□ -1.95
RFC4P35249 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
RFC4P35249 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.86□□□□□ -1.95
RFC4P35249 AL136370.1-201ENST00000608166 691 ntBASIC2.86□□□□□ -1.95
RFC4P35249 AL359198.2-201ENST00000611836 194 ntBASIC2.86□□□□□ -1.95
RFC4P35249 AL138478.1-201ENST00000612252 832 ntBASIC2.86□□□□□ -1.95
RFC4P35249 AC010608.3-201ENST00000625048 527 ntBASIC2.86□□□□□ -1.95
RFC4P35249 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.86□□□□□ -1.95
RFC4P35249 LINC02211-204ENST00000642024 1070 ntBASIC2.86□□□□□ -1.95
RFC4P35249 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
RFC4P35249 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFC4P35249 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
RFC4P35249 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RFC4P35249 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
RFC4P35249 MTND5P29-201ENST00000458676 1807 ntBASIC2.85□□□□□ -1.95
RFC4P35249 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RFC4P35249 RNA5SP88-201ENST00000365560 109 ntBASIC2.85□□□□□ -1.95
RFC4P35249 MIR767-201ENST00000390228 109 ntBASIC2.85□□□□□ -1.95
RFC4P35249 AL023284.1-201ENST00000403956 276 ntBASIC2.85□□□□□ -1.95
RFC4P35249 AC068533.2-201ENST00000411872 306 ntBASIC2.85□□□□□ -1.95
RFC4P35249 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.85□□□□□ -1.95
RFC4P35249 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC4P35249 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC4P35249 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms