Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC007742.2-201ENST00000618226 398 ntBASIC1.65□□□□□ -2.15
CPS1P31327 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CPS1P31327 SNORA70.7-201ENST00000384159 133 ntBASIC1.64□□□□□ -2.15
CPS1P31327 RPL7P27-201ENST00000403775 720 ntBASIC1.64□□□□□ -2.15
CPS1P31327 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.64□□□□□ -2.15
CPS1P31327 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
CPS1P31327 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.64□□□□□ -2.15
CPS1P31327 RNU6-347P-201ENST00000516658 105 ntBASIC1.64□□□□□ -2.15
CPS1P31327 CYP3A137P-201ENST00000562436 69 ntBASIC1.64□□□□□ -2.15
CPS1P31327 AP003122.6-201ENST00000623831 495 ntBASIC1.64□□□□□ -2.15
CPS1P31327 SGO1P2-201ENST00000429458 1589 ntBASIC1.64□□□□□ -2.15
CPS1P31327 MTND4P27-201ENST00000450813 1354 ntBASIC1.64□□□□□ -2.15
CPS1P31327 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.64□□□□□ -2.15
CPS1P31327 RNA5SP257-201ENST00000363023 116 ntBASIC1.63□□□□□ -2.15
CPS1P31327 Y_RNA.115-201ENST00000363272 98 ntBASIC1.63□□□□□ -2.15
CPS1P31327 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CPS1P31327 RPL31P52-201ENST00000407532 367 ntBASIC1.63□□□□□ -2.15
CPS1P31327 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
CPS1P31327 EZH2P1-201ENST00000431167 291 ntBASIC1.63□□□□□ -2.15
CPS1P31327 UBE2FP3-201ENST00000436366 524 ntBASIC1.63□□□□□ -2.15
CPS1P31327 RPS26P56-201ENST00000444468 240 ntBASIC1.63□□□□□ -2.15
CPS1P31327 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.63□□□□□ -2.15
CPS1P31327 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.63□□□□□ -2.15
CPS1P31327 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.63□□□□□ -2.15
CPS1P31327 AC105245.1-201ENST00000581934 244 ntBASIC1.63□□□□□ -2.15
CPS1P31327 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.63□□□□□ -2.15
CPS1P31327 AL590095.2-201ENST00000604136 117 ntBASIC1.63□□□□□ -2.15
CPS1P31327 AC008962.1-201ENST00000605729 304 ntBASIC1.63□□□□□ -2.15
CPS1P31327 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CPS1P31327 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CPS1P31327 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CPS1P31327 RNU6-1077P-201ENST00000410506 102 ntBASIC1.62□□□□□ -2.15
CPS1P31327 ZNF90P2-204ENST00000419323 1075 ntBASIC1.62□□□□□ -2.15
CPS1P31327 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.62□□□□□ -2.15
CPS1P31327 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.62□□□□□ -2.15
CPS1P31327 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.62□□□□□ -2.15
CPS1P31327 RNA5SP384-201ENST00000516615 116 ntBASIC1.62□□□□□ -2.15
CPS1P31327 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.62□□□□□ -2.15
CPS1P31327 MIR4295-201ENST00000585286 85 ntBASIC1.62□□□□□ -2.15
CPS1P31327 VN1R107P-201ENST00000601784 209 ntBASIC1.62□□□□□ -2.15
CPS1P31327 LLPHP1-201ENST00000603571 367 ntBASIC1.62□□□□□ -2.15
CPS1P31327 AL133507.1-201ENST00000605269 557 ntBASIC1.62□□□□□ -2.15
CPS1P31327 AC106028.5-201ENST00000610332 395 ntBASIC1.62□□□□□ -2.15
CPS1P31327 AC006338.1-201ENST00000618453 749 ntBASIC1.62□□□□□ -2.15
CPS1P31327 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CPS1P31327 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CPS1P31327 HMGB1P5-201ENST00000255320 642 ntBASIC1.61□□□□□ -2.15
CPS1P31327 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CPS1P31327 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
CPS1P31327 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.61□□□□□ -2.15
CPS1P31327 HMGN2P30-201ENST00000423237 256 ntBASIC1.61□□□□□ -2.15
CPS1P31327 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPS1P31327 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.61□□□□□ -2.15
CPS1P31327 ATG12P2-201ENST00000456830 416 ntBASIC1.61□□□□□ -2.15
CPS1P31327 RPL31P41-201ENST00000477967 372 ntBASIC1.61□□□□□ -2.15
CPS1P31327 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.61□□□□□ -2.15
CPS1P31327 AC021755.4-201ENST00000616620 456 ntBASIC1.61□□□□□ -2.15
CPS1P31327 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.61□□□□□ -2.15
CPS1P31327 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.61□□□□□ -2.15
CPS1P31327 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.61□□□□□ -2.15
CPS1P31327 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPS1P31327 Y_RNA.458-201ENST00000384240 102 ntBASIC1.61□□□□□ -2.15
CPS1P31327 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CPS1P31327 SDCBPP1-201ENST00000440192 890 ntBASIC1.61□□□□□ -2.15
CPS1P31327 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.61□□□□□ -2.15
CPS1P31327 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
CPS1P31327 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
CPS1P31327 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.61□□□□□ -2.15
CPS1P31327 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPS1P31327 AC006065.5-201ENST00000623427 349 ntBASIC1.61□□□□□ -2.15
CPS1P31327 AC132825.8-201ENST00000640783 297 ntBASIC1.61□□□□□ -2.15
CPS1P31327 AC111188.2-201ENST00000529697 1387 ntBASIC1.6□□□□□ -2.15
CPS1P31327 SNORA14A-201ENST00000364773 135 ntBASIC1.6□□□□□ -2.15
CPS1P31327 PGBD4P6-201ENST00000421501 610 ntBASIC1.6□□□□□ -2.15
CPS1P31327 UBE2V1P6-201ENST00000430840 422 ntBASIC1.6□□□□□ -2.15
CPS1P31327 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.6□□□□□ -2.15
CPS1P31327 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.6□□□□□ -2.15
CPS1P31327 AC021382.1-201ENST00000483523 359 ntBASIC1.6□□□□□ -2.15
CPS1P31327 AC104685.1-201ENST00000502445 371 ntBASIC1.6□□□□□ -2.15
CPS1P31327 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.6□□□□□ -2.15
CPS1P31327 RNA5SP395-201ENST00000516567 118 ntBASIC1.6□□□□□ -2.15
CPS1P31327 AC025918.2-201ENST00000558683 763 ntBASIC1.6□□□□□ -2.15
CPS1P31327 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.6□□□□□ -2.15
CPS1P31327 UBE2L4-201ENST00000587688 464 ntBASIC1.6□□□□□ -2.15
CPS1P31327 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
CPS1P31327 RNU6-600P-201ENST00000362524 99 ntBASIC1.59□□□□□ -2.16
CPS1P31327 RNA5SP62-201ENST00000363457 110 ntBASIC1.59□□□□□ -2.16
CPS1P31327 SNORA51.2-201ENST00000364595 132 ntBASIC1.59□□□□□ -2.16
CPS1P31327 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.16
CPS1P31327 MIR524-201ENST00000385242 87 ntBASIC1.59□□□□□ -2.16
CPS1P31327 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.59□□□□□ -2.16
CPS1P31327 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.59□□□□□ -2.16
CPS1P31327 AC093852.1-201ENST00000503587 266 ntBASIC1.59□□□□□ -2.16
CPS1P31327 AC007275.1-201ENST00000621243 671 ntBASIC1.59□□□□□ -2.16
CPS1P31327 AC073055.1-201ENST00000456901 1621 ntBASIC1.59□□□□□ -2.16
CPS1P31327 CCNB2P1-201ENST00000399411 1150 ntBASIC1.58□□□□□ -2.16
CPS1P31327 AL355497.1-201ENST00000406262 551 ntBASIC1.58□□□□□ -2.16
CPS1P31327 RPL31P63-201ENST00000422565 375 ntBASIC1.58□□□□□ -2.16
CPS1P31327 AL590233.1-201ENST00000430017 456 ntBASIC1.58□□□□□ -2.16
CPS1P31327 RNA5SP233-201ENST00000459153 113 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms