Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC8P31273 MTND1P15-201ENST00000579262 949 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 MIR4513-201ENST00000581077 86 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 MIR4672-201ENST00000583126 81 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC8P31273 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC8P31273 PRELID3BP8-201ENST00000604148 295 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 AC097468.3-201ENST00000607956 456 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 AL450472.3-201ENST00000615578 367 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 AC027807.2-201ENST00000616099 408 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 MIR6076-201ENST00000617521 113 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 AC068792.1-201ENST00000621354 417 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 MTND4P4-201ENST00000439033 1366 ntBASIC3.45□□□□□ -1.86
HOXC8P31273 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC8P31273 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HOXC8P31273 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC8P31273 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC8P31273 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC8P31273 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC8P31273 AC008568.2-201ENST00000623862 2313 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC092447.10-201ENST00000620607 1652 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 MIR30E-201ENST00000362104 92 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 Y_RNA.97-201ENST00000363094 102 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 RNU6-343P-201ENST00000364709 104 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 SNORA75-201ENST00000384158 137 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 Y_RNA.500-201ENST00000384466 111 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 Y_RNA.517-201ENST00000384551 106 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 U8.14-201ENST00000390843 143 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 RNU2-16P-201ENST00000410712 136 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 Y_RNA.619-201ENST00000410951 90 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 RPL17P12-201ENST00000413391 526 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC8P31273 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC8P31273 RPL7L1P10-201ENST00000427790 463 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AL356867.1-201ENST00000429623 299 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC8P31273 OR4K11P-201ENST00000431829 904 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC8P31273 AC108734.1-201ENST00000439549 399 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 MTCO1P27-201ENST00000448269 226 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC8P31273 RPL23AP14-201ENST00000468281 468 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AP002884.2-201ENST00000471647 395 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 HMGN2P13-201ENST00000476476 274 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AP000797.1-201ENST00000478870 387 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 RPL30P14-201ENST00000482744 348 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC093809.1-201ENST00000509155 340 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC8P31273 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC8P31273 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC8P31273 SETP2-201ENST00000553886 926 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 TGIF1P1-201ENST00000558095 802 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC083760.1-201ENST00000589621 670 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC087683.1-201ENST00000591187 441 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC004492.1-201ENST00000607036 742 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC8P31273 AC009570.1-201ENST00000609599 745 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 AC079597.1-201ENST00000624306 508 ntBASIC3.44□□□□□ -1.86
HOXC8P31273 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC8P31273 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC8P31273 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC8P31273 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
HOXC8P31273 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC8P31273 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC8P31273 RNU4-91P-201ENST00000364778 135 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 RNU6-637P-201ENST00000384050 107 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 RNU6-76P-201ENST00000384060 104 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 SNORA1.3-201ENST00000384676 136 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 SNORD15B-201ENST00000384714 146 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 RPS4XP3-201ENST00000398541 413 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 U3.42-201ENST00000408746 214 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC8P31273 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 USP9YP36-201ENST00000424581 829 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC8P31273 AL590383.1-201ENST00000428602 75 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC8P31273 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC8P31273 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC8P31273 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 MRPS31P2-201ENST00000451581 518 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 MTND2P24-201ENST00000453434 806 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC8P31273 RPS29P26-201ENST00000477483 171 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AC034222.1-201ENST00000494052 532 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC8P31273 SCARNA20.6-201ENST00000517251 106 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 RNU6-711P-201ENST00000517255 106 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC8P31273 AP002748.2-201ENST00000528671 348 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AP004247.1-201ENST00000531556 1289 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC8P31273 AC125611.2-201ENST00000551907 647 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms