Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MTND1P28-201ENST00000435623 950 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN3P26045 AL122001.1-201ENST00000457027 370 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AC092798.1-201ENST00000458542 409 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN3P26045 RPS15AP36-201ENST00000492022 382 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN3P26045 AC022616.6-201ENST00000520479 119 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.21□□□□□ -1.9
PTPN3P26045 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN3P26045 DNAJC8P1-201ENST00000554535 372 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AL355836.1-201ENST00000555951 870 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.21□□□□□ -1.9
PTPN3P26045 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN3P26045 AL606834.2-201ENST00000602954 668 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 U73023.1-201ENST00000603134 700 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AP001981.2-201ENST00000603241 418 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AL133393.1-201ENST00000603277 287 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN3P26045 TUG1_2.1-201ENST00000614234 87 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AC108479.2-201ENST00000617314 601 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AL603839.4-201ENST00000624658 1005 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 AP003399.1-201ENST00000637534 361 ntBASIC3.21□□□□□ -1.9
PTPN3P26045 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN3P26045 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PTPN3P26045 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN3P26045 OR4G2P-202ENST00000641004 1759 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
PTPN3P26045 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN3P26045 OR1S2-201ENST00000302592 978 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN3P26045 SNORA63.1-201ENST00000362493 131 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN3P26045 RNY3P10-201ENST00000384764 102 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 RNVU1-14-201ENST00000384770 164 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTPN3P26045 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTPN3P26045 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN3P26045 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN3P26045 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN3P26045 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.2□□□□□ -1.9
PTPN3P26045 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN3P26045 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN3P26045 PGBD4P3-201ENST00000440731 581 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 KATNBL1P3-201ENST00000443475 909 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 TAF9P1-201ENST00000445421 515 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN3P26045 TAF9P2-201ENST00000454958 515 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AC108059.3-201ENST00000456388 214 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AL031183.1-201ENST00000457667 207 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN3P26045 AC109925.1-201ENST00000478069 331 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN3P26045 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN3P26045 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN3P26045 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 Y_RNA.695-201ENST00000516715 107 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AP003467.2-201ENST00000520175 319 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN3P26045 AC100870.1-201ENST00000522035 505 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTPN3P26045 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.2□□□□□ -1.9
PTPN3P26045 AP002748.2-201ENST00000528671 348 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AP000867.2-201ENST00000532468 320 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN3P26045 OR4H12P-201ENST00000556269 907 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN3P26045 AF038458.1-201ENST00000588406 262 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 GLUD1P4-201ENST00000590914 418 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 MIR7112-201ENST00000616126 65 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 AC138932.5-201ENST00000617759 563 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.2□□□□□ -1.9
PTPN3P26045 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PTPN3P26045 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.2□□□□□ -1.9
PTPN3P26045 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN3P26045 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN3P26045 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN3P26045 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN3P26045 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN3P26045 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN3P26045 RNU6-278P-201ENST00000390945 109 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 TXNP7-201ENST00000406296 293 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 HMGN1P14-201ENST00000412459 517 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 AC007899.1-201ENST00000412776 775 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 SPA17P1-201ENST00000416656 452 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 AL158156.1-201ENST00000422509 473 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 AL451062.2-201ENST00000427515 271 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN3P26045 TIMM9P1-201ENST00000436122 256 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN3P26045 ST13P20-201ENST00000447996 1065 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN3P26045 RPS20P20-201ENST00000460498 340 ntBASIC3.19□□□□□ -1.9
PTPN3P26045 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms