Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD8P13378 Y_RNA.19-201ENST00000362462 99 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 Y_RNA.214-201ENST00000364201 112 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 RNU4-50P-201ENST00000364361 141 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 SNORA71.2-201ENST00000364941 134 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 Y_RNA.551-201ENST00000384661 102 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 RNU6-33P-201ENST00000384793 107 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 SNORD73A-201ENST00000386062 65 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 Z98745.1-201ENST00000402553 494 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 AL356387.2-201ENST00000422272 243 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 ELOCP20-201ENST00000422460 345 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 DAP3P1-201ENST00000441522 278 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 AL121871.1-201ENST00000443413 436 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 MRPL48P1-201ENST00000445390 636 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 CHEK2P4-201ENST00000450340 246 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 RPL21P41-201ENST00000459863 264 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 RPL7AP28-201ENST00000464513 571 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 AC011276.1-201ENST00000469688 323 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 AC093852.1-201ENST00000503587 266 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 HMGB3P17-201ENST00000504195 649 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 ERHP1-201ENST00000523006 310 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXD8P13378 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXD8P13378 RPS29P30-201ENST00000600975 111 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 RAC1P9-201ENST00000604990 392 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 AL160281.1-201ENST00000605307 311 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 MIR6830-201ENST00000636015 70 ntBASIC5.17□□□□□ -1.58
HOXD8P13378 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXD8P13378 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD8P13378 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
HOXD8P13378 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HOXD8P13378 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD8P13378 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXD8P13378 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 SAGE4P-201ENST00000442271 3381 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 SALL4P2-201ENST00000423288 2910 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXD8P13378 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 RNY1P16-201ENST00000363063 111 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 RNU6-263P-201ENST00000363811 107 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 AC019155.1-201ENST00000382242 574 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXD8P13378 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD8P13378 HMGB1P25-201ENST00000468402 607 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 RN7SL41P-201ENST00000476144 297 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 RN7SL604P-201ENST00000492589 296 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXD8P13378 RN7SKP82-201ENST00000516786 223 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 AP005019.3-201ENST00000620418 560 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 AC130454.1-201ENST00000622948 401 ntBASIC5.16□□□□□ -1.58
HOXD8P13378 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXD8P13378 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXD8P13378 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
HOXD8P13378 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD8P13378 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD8P13378 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD8P13378 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
HOXD8P13378 AL022322.2-201ENST00000624072 20397 ntBASIC5.15□□□□□ -1.58
HOXD8P13378 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXD8P13378 RNU6-770P-201ENST00000363929 105 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AL138885.1-201ENST00000405921 675 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 RNU4-78P-201ENST00000410940 126 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 BX842559.1-201ENST00000419615 532 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 CYP4F29P-201ENST00000420685 446 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AC104333.2-201ENST00000422630 192 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 RPL7AP25-201ENST00000423357 805 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AC073063.1-201ENST00000434352 607 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD8P13378 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD8P13378 GZMAP1-201ENST00000503054 631 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AC015795.1-201ENST00000513669 327 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 Y_RNA.687-201ENST00000516558 91 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 RNU6-182P-201ENST00000516970 105 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AC144568.1-201ENST00000520139 137 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD8P13378 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD8P13378 CBX3P8-201ENST00000532412 525 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD8P13378 OR4H12P-201ENST00000556269 907 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
HOXD8P13378 VN1R91P-201ENST00000594377 169 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 AL390123.1-201ENST00000603216 237 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 MIR6716-201ENST00000613413 80 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 SDR42E1P2-201ENST00000614861 481 ntBASIC5.15□□□□□ -1.59
HOXD8P13378 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD8P13378 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HOXD8P13378 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD8P13378 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD8P13378 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD8P13378 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD8P13378 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
HOXD8P13378 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD8P13378 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms