Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL359634.1-202ENST00000404721 284 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 RN7SKP142-201ENST00000411236 328 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 HMGN1P14-201ENST00000412459 517 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 Z99755.1-201ENST00000414048 380 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 RPS15AP12-201ENST00000419498 388 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AL451054.2-201ENST00000420896 202 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AL353678.1-201ENST00000422735 741 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC019097.1-201ENST00000424783 735 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 TAF9P1-201ENST00000445421 515 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC008264.1-201ENST00000447612 367 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AL590664.1-201ENST00000448065 339 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 TAF9P2-201ENST00000454958 515 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 RPL31P3-201ENST00000458430 332 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 RN7SL442P-201ENST00000473804 320 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC021205.2-201ENST00000480069 347 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 RN7SL504P-201ENST00000494496 287 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC093534.1-201ENST00000504977 132 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 MTND5P13-201ENST00000513046 1079 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AP003467.2-201ENST00000520175 319 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 MIR4325-201ENST00000583049 90 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 HMGN1P30-201ENST00000589286 268 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC008250.2-201ENST00000615261 205 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC108479.2-201ENST00000617314 601 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC006338.1-201ENST00000618453 749 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC006111.3-201ENST00000622137 383 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC027309.3-201ENST00000623419 351 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AC099654.13-201ENST00000639774 207 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 AL513302.2-201ENST00000562313 1842 ntBASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40ALP0C0E4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 RNU6-1284P-201ENST00000363701 100 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 MIR634-201ENST00000385208 97 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 SNORA40.3-201ENST00000390964 122 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 SNORA48.5-201ENST00000391143 135 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AL357075.1-201ENST00000404107 726 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AL513331.1-201ENST00000411908 397 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 HMGB3P23-201ENST00000414981 585 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC119618.1-201ENST00000434191 222 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC093156.1-201ENST00000440382 670 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 CBWD4P-201ENST00000445695 655 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC140076.1-201ENST00000449897 361 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 MTND1P12-201ENST00000455231 147 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC117532.1-201ENST00000514638 323 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 RPL12P22-201ENST00000519073 490 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 OR5G4P-201ENST00000525251 760 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AP003122.4-201ENST00000530980 758 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 MIR3186-201ENST00000577404 85 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AC015917.1-201ENST00000579654 510 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AP000860.1-201ENST00000605250 559 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 AL603839.4-201ENST00000624658 1005 ntBASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40ALP0C0E4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 OR1S2-201ENST00000302592 978 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 Y_RNA.77-201ENST00000362962 107 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 SNORD116-9-201ENST00000384000 95 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 SNORD116-3-201ENST00000384287 95 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 SNORD116-1-201ENST00000384335 95 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 SNORD116-7-201ENST00000384404 95 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms