Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SCARNA24.1-201ENST00000516465 137 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 IGKV2D-36-201ENST00000518643 226 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 AP006245.1-201ENST00000522549 120 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
SNRPA1P09661 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.4□□□□□ -1.71
SNRPA1P09661 SETP2-201ENST00000553886 926 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.4□□□□□ -1.71
SNRPA1P09661 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.4□□□□□ -1.71
SNRPA1P09661 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNRPA1P09661 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.4□□□□□ -1.71
SNRPA1P09661 AL158211.4-201ENST00000606988 584 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 AC105429.2-201ENST00000610567 517 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 AC010338.1-201ENST00000621823 717 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 MIR4727-201ENST00000622232 55 ntBASIC4.4□□□□□ -1.71
SNRPA1P09661 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.4□□□□□ -1.71
SNRPA1P09661 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNRPA1P09661 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.4□□□□□ -1.71
SNRPA1P09661 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.4□□□□□ -1.71
SNRPA1P09661 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNRPA1P09661 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.39□□□□□ -1.71
SNRPA1P09661 Z83843.1-201ENST00000604070 3685 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNRPA1P09661 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.39□□□□□ -1.71
SNRPA1P09661 ZNF680P1-201ENST00000436625 1469 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SNRPA1P09661 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNRPA1P09661 RNU6-1120P-201ENST00000362988 108 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 RNU6-283P-201ENST00000364788 107 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 SNORA69-201ENST00000383895 132 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 RNA5SP39-201ENST00000411245 120 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 Z92545.1-201ENST00000411782 234 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 SNRPEP10-201ENST00000420249 274 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.39□□□□□ -1.71
SNRPA1P09661 TIMM9P1-201ENST00000436122 256 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 SEPT14P3-201ENST00000439401 183 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 AL732372.2-207ENST00000445840 183 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 RPS29P31-201ENST00000446147 164 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 SEPT14P2-201ENST00000453405 183 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.39□□□□□ -1.71
SNRPA1P09661 RPL37P6-202ENST00000464216 403 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 OR5H5P-201ENST00000503164 928 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.39□□□□□ -1.71
SNRPA1P09661 SEPT14P4-201ENST00000513445 186 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 RNU6-835P-201ENST00000516974 104 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 FO082796.1-201ENST00000523795 183 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.39□□□□□ -1.71
SNRPA1P09661 AC026333.2-201ENST00000542164 106 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.39□□□□□ -1.71
SNRPA1P09661 BNIP3P10-201ENST00000605360 577 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 TUG1_1.1-201ENST00000610654 145 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 MIR486-1-201ENST00000612171 68 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.39□□□□□ -1.71
SNRPA1P09661 AC103858.2-201ENST00000621471 543 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 AC091925.2-201ENST00000625059 256 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.39□□□□□ -1.71
SNRPA1P09661 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
SNRPA1P09661 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNRPA1P09661 CKAP2P1-201ENST00000555477 2049 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SNRPA1P09661 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNRPA1P09661 Y_RNA.11-201ENST00000362375 109 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 Y_RNA.813-201ENST00000364639 102 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 Y_RNA.279-201ENST00000364763 95 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 RNY3P13-201ENST00000365542 102 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 RNU6-108P-201ENST00000365558 107 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 AL591416.1-201ENST00000404015 867 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.38□□□□□ -1.71
SNRPA1P09661 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.38□□□□□ -1.71
SNRPA1P09661 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.38□□□□□ -1.71
SNRPA1P09661 AL138799.3-201ENST00000438968 350 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 CALM1P1-201ENST00000442082 433 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 RAC1P7-201ENST00000445367 377 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.38□□□□□ -1.71
SNRPA1P09661 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.38□□□□□ -1.71
SNRPA1P09661 SNRPGP6-201ENST00000451124 220 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.38□□□□□ -1.71
SNRPA1P09661 RPS20P24-201ENST00000457473 361 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 RN7SL93P-201ENST00000463035 293 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.38□□□□□ -1.71
SNRPA1P09661 AC123904.3-201ENST00000547218 814 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 MIR4276-201ENST00000584832 70 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 AC098848.2-201ENST00000588023 330 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 AC012493.2-201ENST00000595083 291 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 KC877982.1-201ENST00000602313 470 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNRPA1P09661 uc_338.12-201ENST00000616344 181 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 AC024940.5-201ENST00000622889 474 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SNRPA1P09661 AL359893.1-201ENST00000447628 1580 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 AC092326.2-201ENST00000624772 1561 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.38□□□□□ -1.71
SNRPA1P09661 AC068647.1-201ENST00000489539 2265 ntBASIC4.38□□□□□ -1.71
SNRPA1P09661 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.38□□□□□ -1.71
SNRPA1P09661 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNRPA1P09661 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNRPA1P09661 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNRPA1P09661 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.37□□□□□ -1.71
SNRPA1P09661 ZNF734P-201ENST00000419494 1534 ntBASIC4.37□□□□□ -1.71
SNRPA1P09661 AC073073.2-201ENST00000609827 2578 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms