Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HOXC4P09017 MIR6076-201ENST00000617521 113 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AL353748.2-201ENST00000622148 471 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 Z69908.1-201ENST00000622603 247 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 CYP3A51P-201ENST00000633513 256 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HOXC4P09017 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXC4P09017 MAPK10-322ENST00000641485 4530 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 RNU6-1066P-201ENST00000363573 105 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 RNU4-75P-201ENST00000364621 146 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 SUGT1P1-201ENST00000379514 476 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AL031577.2-201ENST00000404133 280 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 NPM1P11-201ENST00000417106 855 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 ATG3P1-201ENST00000419507 911 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 AL035407.1-201ENST00000429211 571 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC4P09017 AL360221.1-201ENST00000445989 335 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC4P09017 SETP11-201ENST00000473027 690 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 MTND1P22-201ENST00000510572 951 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HOXC4P09017 SNORA48.10-201ENST00000516965 160 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC4P09017 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXC4P09017 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC4P09017 ROCK1P1-201ENST00000573767 549 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 NRBF2P5-201ENST00000603087 788 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AL136981.2-201ENST00000617319 734 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AC098679.4-201ENST00000624241 654 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AC092608.2-201ENST00000624427 218 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AC091925.2-201ENST00000625059 256 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 AC092192.1-201ENST00000633154 1018 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 MKKS-204ENST00000639674 192 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXC4P09017 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXC4P09017 AC006378.2-201ENST00000623178 2476 ntBASIC2.64□□□□□ -1.99
HOXC4P09017 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
HOXC4P09017 MTCO1P23-201ENST00000415223 1526 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC4P09017 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXC4P09017 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC4P09017 RNU6-492P-201ENST00000363035 104 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 RNU4-24P-201ENST00000364565 139 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC4P09017 RNU5A-2P-201ENST00000384337 116 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 SNORD116-4-201ENST00000384733 96 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 MIR181B1-201ENST00000385240 110 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AL139095.1-201ENST00000404326 391 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 FAT1P1-201ENST00000406588 507 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AL450338.1-201ENST00000407987 512 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 RNU6-920P-201ENST00000410926 92 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 RNA5SP492-201ENST00000411330 114 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC4P09017 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC4P09017 AC092634.6-201ENST00000418558 192 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 MTCO1P39-201ENST00000426148 480 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC4P09017 ARL5AP4-201ENST00000430731 512 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXC4P09017 AC004866.2-201ENST00000438285 481 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC4P09017 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXC4P09017 RNA5SP310-201ENST00000459084 116 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 RPL30P6-201ENST00000475925 342 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC4P09017 AC010625.1-201ENST00000511296 403 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 RNU4-29P-201ENST00000515943 174 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC103783.1-201ENST00000520506 373 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC060788.1-201ENST00000521318 469 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXC4P09017 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXC4P09017 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC4P09017 AC119751.7-201ENST00000600494 245 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AL590229.1-201ENST00000603497 542 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 RPL23AP92-201ENST00000603609 255 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AP000811.1-201ENST00000603803 651 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC012557.2-201ENST00000605919 418 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC006270.3-201ENST00000605967 1036 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AC005046.1-201ENST00000608515 625 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXC4P09017 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXC4P09017 AC073114.1-201ENST00000612027 490 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 AL136360.1-201ENST00000503377 1900 ntBASIC2.63□□□□□ -1.99
HOXC4P09017 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC4P09017 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC4P09017 AL390237.1-201ENST00000404226 1415 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 AC092104.1-201ENST00000497346 1441 ntBASIC2.62□□□□□ -1.99
HOXC4P09017 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms