Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 snoU109.4-201ENST00000458953 143 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 RPL21P39-201ENST00000463605 483 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC090453.1-201ENST00000495560 436 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC105914.1-201ENST00000511798 226 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A2P08572 AP001804.3-201ENST00000525146 880 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC022690.1-201ENST00000526681 550 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.78□□□□□ -2.12
COL4A2P08572 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A2P08572 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A2P08572 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.78□□□□□ -2.12
COL4A2P08572 AP001542.2-201ENST00000593141 364 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC002487.1-201ENST00000604565 994 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC068880.4-201ENST00000623082 495 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC097372.4-201ENST00000625025 466 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A2P08572 AC103710.2-202ENST00000641454 2853 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
COL4A2P08572 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A2P08572 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
COL4A2P08572 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 RNU2-15P-201ENST00000410692 191 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A2P08572 AL136133.1-201ENST00000413694 376 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A2P08572 RPL7P30-201ENST00000420888 709 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 MTCO3P1-205ENST00000422088 832 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A2P08572 BX322784.1-201ENST00000455793 1077 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 snoU13.18-201ENST00000459483 104 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 ARL2BPP2-201ENST00000550907 489 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.77□□□□□ -2.13
COL4A2P08572 AL163153.1-201ENST00000554223 283 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A2P08572 AL035411.2-201ENST00000604022 421 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A2P08572 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.77□□□□□ -2.13
COL4A2P08572 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A2P08572 AC080188.3-201ENST00000624842 748 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A2P08572 FO624990.1-201ENST00000636373 85 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A2P08572 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.77□□□□□ -2.13
COL4A2P08572 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A2P08572 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL4A2P08572 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A2P08572 AL035405.1-201ENST00000400795 710 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 USP9YP19-201ENST00000412165 485 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AC092447.6-201ENST00000414578 210 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AL353729.1-201ENST00000425044 720 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A2P08572 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A2P08572 USP9YP15-201ENST00000442391 422 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 MTCO1P48-201ENST00000448024 1096 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A2P08572 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.77□□□□□ -2.13
COL4A2P08572 NDUFA5P6-201ENST00000542110 379 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 MTCO1P40-201ENST00000574371 625 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AL445435.1-201ENST00000604232 665 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.77□□□□□ -2.13
COL4A2P08572 AC006329.2-201ENST00000611491 394 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 MIR8081-201ENST00000611533 95 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 AC091925.2-201ENST00000625059 256 ntBASIC1.77□□□□□ -2.13
COL4A2P08572 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A2P08572 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
COL4A2P08572 RNU6-575P-201ENST00000411326 105 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 RPL17P12-201ENST00000413391 526 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 UBE2V1P6-201ENST00000430840 422 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A2P08572 OR6K5P-201ENST00000447050 945 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AIG1P1-201ENST00000503376 148 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A2P08572 AC091860.1-201ENST00000505723 432 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A2P08572 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.76□□□□□ -2.13
COL4A2P08572 RNU1-40P-201ENST00000516816 164 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 RNU1-97P-201ENST00000516872 164 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.76□□□□□ -2.13
COL4A2P08572 AC092451.2-201ENST00000538746 658 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A2P08572 AC023825.1-201ENST00000566704 1030 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 FAM60BP-201ENST00000578364 658 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A2P08572 AC020895.1-201ENST00000595362 272 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AL109653.1-201ENST00000603091 248 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC106028.5-201ENST00000610332 395 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC008759.3-201ENST00000613300 508 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AL138880.2-201ENST00000616214 239 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC068831.7-201ENST00000616954 363 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AC009318.4-201ENST00000620496 486 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 AL157770.1-201ENST00000623049 439 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 OR1S1-201ENST00000624470 978 ntBASIC1.76□□□□□ -2.13
COL4A2P08572 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms