Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.58□□□□□ -2
RETP07949 AC023424.2-201ENST00000493479 777 ntBASIC2.58□□□□□ -2
RETP07949 MTCYBP17-201ENST00000503579 789 ntBASIC2.58□□□□□ -2
RETP07949 TMEM251P1-201ENST00000503717 318 ntBASIC2.58□□□□□ -2
RETP07949 RNA5SP320-201ENST00000516263 124 ntBASIC2.58□□□□□ -2
RETP07949 RN7SKP31-201ENST00000516354 278 ntBASIC2.58□□□□□ -2
RETP07949 RNA5SP82-201ENST00000516707 92 ntBASIC2.58□□□□□ -2
RETP07949 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.58□□□□□ -2
RETP07949 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.58□□□□□ -2
RETP07949 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.58□□□□□ -2
RETP07949 AL022099.1-201ENST00000604551 712 ntBASIC2.58□□□□□ -2
RETP07949 AC009974.1-201ENST00000608881 455 ntBASIC2.58□□□□□ -2
RETP07949 AC024257.5-201ENST00000612739 531 ntBASIC2.58□□□□□ -2
RETP07949 AC005332.6-201ENST00000613178 446 ntBASIC2.58□□□□□ -2
RETP07949 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RETP07949 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.58□□□□□ -2
RETP07949 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.58□□□□□ -2
RETP07949 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.58□□□□□ -2
RETP07949 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.58□□□□□ -2
RETP07949 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
RETP07949 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.57□□□□□ -2
RETP07949 RPL21P132-201ENST00000331267 462 ntBASIC2.57□□□□□ -2
RETP07949 RNU6-1155P-201ENST00000363554 107 ntBASIC2.57□□□□□ -2
RETP07949 RNA5SP99-201ENST00000364020 114 ntBASIC2.57□□□□□ -2
RETP07949 RNU6-413P-201ENST00000384115 107 ntBASIC2.57□□□□□ -2
RETP07949 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.57□□□□□ -2
RETP07949 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.57□□□□□ -2
RETP07949 AL136372.1-201ENST00000403060 228 ntBASIC2.57□□□□□ -2
RETP07949 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.57□□□□□ -2
RETP07949 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 USP9YP34-201ENST00000453983 808 ntBASIC2.57□□□□□ -2
RETP07949 AL109741.2-201ENST00000455561 343 ntBASIC2.57□□□□□ -2
RETP07949 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 RPS15AP17-201ENST00000470598 390 ntBASIC2.57□□□□□ -2
RETP07949 RPS15AP34-201ENST00000487776 387 ntBASIC2.57□□□□□ -2
RETP07949 KLRA1P-201ENST00000503499 986 ntBASIC2.57□□□□□ -2
RETP07949 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.57□□□□□ -2
RETP07949 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 RN7SKP24-201ENST00000515888 284 ntBASIC2.57□□□□□ -2
RETP07949 RNA5SP458-201ENST00000516188 119 ntBASIC2.57□□□□□ -2
RETP07949 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.57□□□□□ -2
RETP07949 OR5AK1P-201ENST00000524837 922 ntBASIC2.57□□□□□ -2
RETP07949 RANP3-201ENST00000530970 276 ntBASIC2.57□□□□□ -2
RETP07949 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.57□□□□□ -2
RETP07949 MIR1273D-201ENST00000577266 86 ntBASIC2.57□□□□□ -2
RETP07949 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.57□□□□□ -2
RETP07949 AL136363.1-201ENST00000605349 337 ntBASIC2.57□□□□□ -2
RETP07949 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.57□□□□□ -2
RETP07949 AC023158.2-201ENST00000614876 543 ntBASIC2.57□□□□□ -2
RETP07949 AC034102.8-201ENST00000615146 484 ntBASIC2.57□□□□□ -2
RETP07949 AC120349.2-201ENST00000625002 298 ntBASIC2.57□□□□□ -2
RETP07949 AC099063.3-201ENST00000642066 185 ntBASIC2.57□□□□□ -2
RETP07949 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
RETP07949 RNU6-636P-201ENST00000384598 107 ntBASIC2.56□□□□□ -2
RETP07949 ERHP2-201ENST00000402323 299 ntBASIC2.56□□□□□ -2
RETP07949 AL592310.1-201ENST00000414330 671 ntBASIC2.56□□□□□ -2
RETP07949 SSR1P2-201ENST00000415208 787 ntBASIC2.56□□□□□ -2
RETP07949 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.56□□□□□ -2
RETP07949 MRPS36P1-201ENST00000421291 307 ntBASIC2.56□□□□□ -2
RETP07949 TMEM167AP1-201ENST00000423409 219 ntBASIC2.56□□□□□ -2
RETP07949 ISCA1P6-201ENST00000427740 390 ntBASIC2.56□□□□□ -2
RETP07949 AL590233.1-201ENST00000430017 456 ntBASIC2.56□□□□□ -2
RETP07949 MTCYBP45-201ENST00000435243 565 ntBASIC2.56□□□□□ -2
RETP07949 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.56□□□□□ -2
RETP07949 RAC1P7-201ENST00000445367 377 ntBASIC2.56□□□□□ -2
RETP07949 AC007327.1-201ENST00000447461 264 ntBASIC2.56□□□□□ -2
RETP07949 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.56□□□□□ -2
RETP07949 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.56□□□□□ -2
RETP07949 RFC5P1-201ENST00000454419 874 ntBASIC2.56□□□□□ -2
RETP07949 Z82190.1-201ENST00000454534 490 ntBASIC2.56□□□□□ -2
RETP07949 AC108734.3-201ENST00000481241 1165 ntBASIC2.56□□□□□ -2
RETP07949 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.56□□□□□ -2
RETP07949 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.56□□□□□ -2
RETP07949 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
RETP07949 AC114322.1-201ENST00000506771 926 ntBASIC2.56□□□□□ -2
RETP07949 MTCYBP16-201ENST00000509187 1129 ntBASIC2.56□□□□□ -2
RETP07949 RNU6-311P-201ENST00000516224 102 ntBASIC2.56□□□□□ -2
RETP07949 RNA5SP471-201ENST00000516971 106 ntBASIC2.56□□□□□ -2
RETP07949 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.56□□□□□ -2
RETP07949 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.56□□□□□ -2
RETP07949 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.56□□□□□ -2
RETP07949 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.56□□□□□ -2
RETP07949 OR7K1P-201ENST00000546439 926 ntBASIC2.56□□□□□ -2
RETP07949 AC125611.1-201ENST00000549563 229 ntBASIC2.56□□□□□ -2
RETP07949 AC023813.2-201ENST00000564321 469 ntBASIC2.56□□□□□ -2
RETP07949 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.56□□□□□ -2
RETP07949 AGGF1P5-201ENST00000567900 919 ntBASIC2.56□□□□□ -2
RETP07949 AC103810.1-201ENST00000579873 453 ntBASIC2.56□□□□□ -2
RETP07949 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.56□□□□□ -2
RETP07949 BNIP3P24-201ENST00000593398 557 ntBASIC2.56□□□□□ -2
RETP07949 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.56□□□□□ -2
RETP07949 MTND3P19-201ENST00000603825 345 ntBASIC2.56□□□□□ -2
RETP07949 AL450336.1-201ENST00000605180 586 ntBASIC2.56□□□□□ -2
RETP07949 AC034229.4-201ENST00000607861 441 ntBASIC2.56□□□□□ -2
RETP07949 AC106028.5-201ENST00000610332 395 ntBASIC2.56□□□□□ -2
RETP07949 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms