Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC007998.5-201ENST00000622938 237 ntBASIC3.46□□□□□ -1.86
RB1P06400 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RB1P06400 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.46□□□□□ -1.86
RB1P06400 MIR622-201ENST00000638396 96 ntBASIC3.46□□□□□ -1.86
RB1P06400 FAM35BP-202ENST00000497389 3337 ntBASIC3.46□□□□□ -1.86
RB1P06400 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
RB1P06400 OR4G2P-202ENST00000641004 1759 ntBASIC3.46□□□□□ -1.86
RB1P06400 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RB1P06400 ELL2P3-201ENST00000457883 1602 ntBASIC3.45□□□□□ -1.86
RB1P06400 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC110774.1-201ENST00000623567 2018 ntBASIC3.45□□□□□ -1.86
RB1P06400 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RB1P06400 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RB1P06400 RNU6-301P-201ENST00000384277 107 ntBASIC3.45□□□□□ -1.86
RB1P06400 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.45□□□□□ -1.86
RB1P06400 TXNP7-201ENST00000406296 293 ntBASIC3.45□□□□□ -1.86
RB1P06400 MIR1302-8-201ENST00000408342 128 ntBASIC3.45□□□□□ -1.86
RB1P06400 RPL21P24-201ENST00000413752 448 ntBASIC3.45□□□□□ -1.86
RB1P06400 AL139281.1-201ENST00000422120 335 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC005094.1-201ENST00000440420 368 ntBASIC3.45□□□□□ -1.86
RB1P06400 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.45□□□□□ -1.86
RB1P06400 RPL17P49-201ENST00000443728 411 ntBASIC3.45□□□□□ -1.86
RB1P06400 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.45□□□□□ -1.86
RB1P06400 MTND2P24-201ENST00000453434 806 ntBASIC3.45□□□□□ -1.86
RB1P06400 SNRPGP9-201ENST00000456025 225 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC010468.1-201ENST00000461022 817 ntBASIC3.45□□□□□ -1.86
RB1P06400 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.45□□□□□ -1.86
RB1P06400 MTND4LP22-201ENST00000508209 276 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.45□□□□□ -1.86
RB1P06400 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.45□□□□□ -1.86
RB1P06400 AC010265.1-201ENST00000513509 211 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.45□□□□□ -1.86
RB1P06400 AC022690.1-201ENST00000526681 550 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC022878.1-201ENST00000530684 149 ntBASIC3.45□□□□□ -1.86
RB1P06400 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.45□□□□□ -1.86
RB1P06400 AL355836.1-201ENST00000555951 870 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.45□□□□□ -1.86
RB1P06400 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.45□□□□□ -1.86
RB1P06400 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.45□□□□□ -1.86
RB1P06400 RPL23AP84-201ENST00000571193 464 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC121334.2-201ENST00000605387 271 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC103710.1-201ENST00000610003 901 ntBASIC3.45□□□□□ -1.86
RB1P06400 AL592295.2-201ENST00000612578 206 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC004696.1-201ENST00000614345 607 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC090132.2-201ENST00000615881 347 ntBASIC3.45□□□□□ -1.86
RB1P06400 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.45□□□□□ -1.86
RB1P06400 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RB1P06400 MIR7153-201ENST00000637758 57 ntBASIC3.45□□□□□ -1.86
RB1P06400 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RB1P06400 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RB1P06400 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RB1P06400 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
RB1P06400 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
RB1P06400 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.45□□□□□ -1.86
RB1P06400 AC093010.3-201ENST00000570269 15214 ntBASIC3.44□□□□□ -1.86
RB1P06400 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RB1P06400 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RB1P06400 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RB1P06400 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
RB1P06400 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RB1P06400 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RB1P06400 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
RB1P06400 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RB1P06400 U3.4-201ENST00000363352 213 ntBASIC3.44□□□□□ -1.86
RB1P06400 RNU6-278P-201ENST00000390945 109 ntBASIC3.44□□□□□ -1.86
RB1P06400 RNU1-101P-201ENST00000391171 127 ntBASIC3.44□□□□□ -1.86
RB1P06400 SNORA48.8-201ENST00000391324 134 ntBASIC3.44□□□□□ -1.86
RB1P06400 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.44□□□□□ -1.86
RB1P06400 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.44□□□□□ -1.86
RB1P06400 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.44□□□□□ -1.86
RB1P06400 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.44□□□□□ -1.86
RB1P06400 AC098826.1-201ENST00000433943 471 ntBASIC3.44□□□□□ -1.86
RB1P06400 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.44□□□□□ -1.86
RB1P06400 MTND2P22-201ENST00000444325 1033 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.44□□□□□ -1.86
RB1P06400 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.44□□□□□ -1.86
RB1P06400 RNA5SP310-201ENST00000459084 116 ntBASIC3.44□□□□□ -1.86
RB1P06400 HMGN2P13-201ENST00000476476 274 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.44□□□□□ -1.86
RB1P06400 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RB1P06400 CDC42P4-201ENST00000510507 563 ntBASIC3.44□□□□□ -1.86
RB1P06400 RNU6-64P-201ENST00000517119 105 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC123904.3-201ENST00000547218 814 ntBASIC3.44□□□□□ -1.86
RB1P06400 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.44□□□□□ -1.86
RB1P06400 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.44□□□□□ -1.86
RB1P06400 AC012414.6-201ENST00000568241 401 ntBASIC3.44□□□□□ -1.86
RB1P06400 MIR2682-201ENST00000580305 110 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.44□□□□□ -1.86
RB1P06400 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.44□□□□□ -1.86
RB1P06400 KC877982.1-201ENST00000602313 470 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC068276.1-201ENST00000605793 379 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC116312.1-201ENST00000606841 314 ntBASIC3.44□□□□□ -1.86
RB1P06400 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
RB1P06400 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.44□□□□□ -1.86
RB1P06400 SDR42E1P2-201ENST00000614861 481 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC010133.1-201ENST00000615809 842 ntBASIC3.44□□□□□ -1.86
RB1P06400 ATP5A1P2-202ENST00000616464 443 ntBASIC3.44□□□□□ -1.86
RB1P06400 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.44□□□□□ -1.86
RB1P06400 AC009878.1-201ENST00000621819 340 ntBASIC3.44□□□□□ -1.86
RB1P06400 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms