Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PIGFP3-201ENST00000441918 722 ntBASIC2.52□□□□□ -2.01
P04436 CBWD4P-201ENST00000445695 655 ntBASIC2.52□□□□□ -2.01
P04436 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.52□□□□□ -2.01
P04436 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.52□□□□□ -2.01
P04436 SNORA59A-201ENST00000459326 152 ntBASIC2.52□□□□□ -2.01
P04436 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.52□□□□□ -2.01
P04436 RPS27P26-201ENST00000494583 239 ntBASIC2.52□□□□□ -2.01
P04436 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.52□□□□□ -2.01
P04436 AC034244.1-201ENST00000507687 207 ntBASIC2.52□□□□□ -2.01
P04436 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
P04436 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.52□□□□□ -2.01
P04436 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.52□□□□□ -2.01
P04436 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.52□□□□□ -2.01
P04436 AP002748.2-201ENST00000528671 348 ntBASIC2.52□□□□□ -2.01
P04436 AP000889.1-201ENST00000530968 660 ntBASIC2.52□□□□□ -2.01
P04436 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.52□□□□□ -2.01
P04436 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
P04436 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.52□□□□□ -2.01
P04436 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.52□□□□□ -2.01
P04436 MTND1P24-201ENST00000552175 861 ntBASIC2.52□□□□□ -2.01
P04436 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
P04436 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.52□□□□□ -2.01
P04436 MIR4319-201ENST00000577285 85 ntBASIC2.52□□□□□ -2.01
P04436 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.52□□□□□ -2.01
P04436 MIR4506-201ENST00000584693 77 ntBASIC2.52□□□□□ -2.01
P04436 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.52□□□□□ -2.01
P04436 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.52□□□□□ -2.01
P04436 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.52□□□□□ -2.01
P04436 BCRP9-201ENST00000605312 388 ntBASIC2.52□□□□□ -2.01
P04436 AL136363.1-201ENST00000605349 337 ntBASIC2.52□□□□□ -2.01
P04436 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.52□□□□□ -2.01
P04436 AC004696.1-201ENST00000614345 607 ntBASIC2.52□□□□□ -2.01
P04436 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.52□□□□□ -2.01
P04436 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.52□□□□□ -2.01
P04436 MIR6852-201ENST00000621699 66 ntBASIC2.52□□□□□ -2.01
P04436 AC009268.2-201ENST00000621925 457 ntBASIC2.52□□□□□ -2.01
P04436 AC002064.3-201ENST00000623448 346 ntBASIC2.52□□□□□ -2.01
P04436 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
P04436 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
P04436 MTND5P7-201ENST00000413558 1798 ntBASIC2.51□□□□□ -2.01
P04436 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
P04436 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
P04436 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
P04436 ANAPC10P1-201ENST00000395991 556 ntBASIC2.51□□□□□ -2.01
P04436 AC099548.1-201ENST00000421443 426 ntBASIC2.51□□□□□ -2.01
P04436 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 AL390023.1-201ENST00000428836 262 ntBASIC2.51□□□□□ -2.01
P04436 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.51□□□□□ -2.01
P04436 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 AL606662.1-201ENST00000445763 553 ntBASIC2.51□□□□□ -2.01
P04436 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 ATG12P2-201ENST00000456830 416 ntBASIC2.51□□□□□ -2.01
P04436 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
P04436 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
P04436 RPS20P20-201ENST00000460498 340 ntBASIC2.51□□□□□ -2.01
P04436 AC118282.1-201ENST00000506408 765 ntBASIC2.51□□□□□ -2.01
P04436 AC093809.1-201ENST00000509155 340 ntBASIC2.51□□□□□ -2.01
P04436 LTV1P1-201ENST00000510683 1237 ntBASIC2.51□□□□□ -2.01
P04436 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.51□□□□□ -2.01
P04436 SNORA9.3-201ENST00000516383 129 ntBASIC2.51□□□□□ -2.01
P04436 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.51□□□□□ -2.01
P04436 AL355836.1-201ENST00000555951 870 ntBASIC2.51□□□□□ -2.01
P04436 TRAV28-201ENST00000557548 323 ntBASIC2.51□□□□□ -2.01
P04436 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 AC068135.2-201ENST00000569293 1028 ntBASIC2.51□□□□□ -2.01
P04436 AC010653.1-201ENST00000571108 881 ntBASIC2.51□□□□□ -2.01
P04436 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.51□□□□□ -2.01
P04436 MIR3605-201ENST00000583214 100 ntBASIC2.51□□□□□ -2.01
P04436 AC083760.1-201ENST00000589621 670 ntBASIC2.51□□□□□ -2.01
P04436 AC006023.1-201ENST00000603944 259 ntBASIC2.51□□□□□ -2.01
P04436 AL161729.4-201ENST00000604650 476 ntBASIC2.51□□□□□ -2.01
P04436 AC025588.2-201ENST00000604851 466 ntBASIC2.51□□□□□ -2.01
P04436 AC079395.3-201ENST00000615161 484 ntBASIC2.51□□□□□ -2.01
P04436 AC073308.1-201ENST00000623696 305 ntBASIC2.51□□□□□ -2.01
P04436 AL356596.1-201ENST00000624230 379 ntBASIC2.51□□□□□ -2.01
P04436 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.51□□□□□ -2.01
P04436 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.51□□□□□ -2.01
P04436 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.51□□□□□ -2.01
P04436 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
P04436 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.5□□□□□ -2.01
P04436 DDX10P1-201ENST00000448545 1933 ntBASIC2.5□□□□□ -2.01
P04436 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.5□□□□□ -2.01
P04436 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
P04436 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
P04436 RNU6-741P-201ENST00000383889 107 ntBASIC2.5□□□□□ -2.01
P04436 RNU6-723P-201ENST00000383973 107 ntBASIC2.5□□□□□ -2.01
P04436 Y_RNA.500-201ENST00000384466 111 ntBASIC2.5□□□□□ -2.01
P04436 MIR181A2-201ENST00000384863 110 ntBASIC2.5□□□□□ -2.01
P04436 RNA5SP354-201ENST00000391247 136 ntBASIC2.5□□□□□ -2.01
P04436 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
P04436 AL512633.1-201ENST00000399931 655 ntBASIC2.5□□□□□ -2.01
P04436 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.5□□□□□ -2.01
P04436 RN7SKP266-201ENST00000410232 287 ntBASIC2.5□□□□□ -2.01
P04436 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.5□□□□□ -2.01
P04436 RPL7P37-201ENST00000425095 738 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms