Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC002542.1-201ENST00000440683 193 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 AC244505.5-201ENST00000443639 207 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 MTCO2P25-201ENST00000447065 681 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 DPPA3P1-201ENST00000448050 469 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 MTND3P10-201ENST00000450967 341 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.17□□□□□ -1.9
COL2A1P02458 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 RPS29P21-201ENST00000496272 170 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 NIPA2P2-201ENST00000496376 1083 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL2A1P02458 SNORA9.3-201ENST00000516383 129 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 Y_RNA.704-201ENST00000516851 102 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 OR8L1P-201ENST00000534005 955 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
COL2A1P02458 AC004217.3-201ENST00000551552 878 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.17□□□□□ -1.9
COL2A1P02458 AC137800.2-201ENST00000574375 120 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.17□□□□□ -1.9
COL2A1P02458 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.17□□□□□ -1.9
COL2A1P02458 BNIP3P9-201ENST00000603714 553 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL2A1P02458 AL121757.2-201ENST00000611223 313 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 AC015726.3-201ENST00000624501 418 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 MIR6863-201ENST00000636112 90 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL2A1P02458 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL2A1P02458 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL2A1P02458 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
COL2A1P02458 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL2A1P02458 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL2A1P02458 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL2A1P02458 RNU5D-1-201ENST00000363299 116 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 Y_RNA.582-201ENST00000391023 95 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RNU6-77P-201ENST00000410554 91 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC068533.2-201ENST00000411872 306 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC109780.2-201ENST00000413467 845 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 BX295541.1-201ENST00000417774 250 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 PTP4A1P1-201ENST00000420539 515 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RPL31P54-201ENST00000429803 370 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC073464.1-201ENST00000429823 534 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AL451074.3-201ENST00000437709 472 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 AL590639.1-201ENST00000456484 337 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC013267.1-201ENST00000458227 267 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 ARL4AP2-201ENST00000507378 601 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 AP005639.2-201ENST00000527592 928 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC243972.3-201ENST00000539655 198 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.16□□□□□ -1.9
COL2A1P02458 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC090525.3-201ENST00000605601 189 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AL390208.1-201ENST00000605885 644 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 DUXAP9-208ENST00000622815 614 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC073348.1-201ENST00000623002 331 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC092608.2-201ENST00000624427 218 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC124864.2-201ENST00000624736 186 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC079228.1-201ENST00000624774 1049 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC099654.5-201ENST00000636479 350 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.16□□□□□ -1.9
COL2A1P02458 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL2A1P02458 AC006026.1-201ENST00000444025 1803 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC093908.1-201ENST00000623125 8092 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL2A1P02458 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL2A1P02458 MIR148B-201ENST00000362252 99 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RNU6-433P-201ENST00000363216 104 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RNA5SP68-201ENST00000363885 119 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RNU6-501P-201ENST00000364072 100 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RNA5SP88-201ENST00000365560 109 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC092745.2-202ENST00000411880 369 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 MTCYBP24-201ENST00000420387 1106 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 OFD1P18Y-201ENST00000420889 959 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 ISCA1P6-201ENST00000427740 390 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 DNAJC19P4-201ENST00000440115 345 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 MTATP6P30-201ENST00000443540 664 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC078785.3-201ENST00000476607 425 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC023424.2-201ENST00000493479 777 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
COL2A1P02458 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 AC022483.1-201ENST00000514020 567 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms