Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CLPTM1O96005 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPTM1O96005 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLPTM1O96005 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
CLPTM1O96005 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.15□□□□□ -1.9
CLPTM1O96005 AC244517.1-201ENST00000606030 2086 ntBASIC3.15□□□□□ -1.9
CLPTM1O96005 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLPTM1O96005 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.15□□□□□ -1.9
CLPTM1O96005 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPTM1O96005 OR5J1P-201ENST00000313544 939 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 RNU5E-1-201ENST00000362477 120 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 SNORA5A-201ENST00000384111 134 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 RNU5A-6P-201ENST00000384136 116 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 RN7SKP53-201ENST00000411337 315 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 UBE2V1P10-201ENST00000414685 269 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC233728.2-201ENST00000425348 757 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 RPL31P35-201ENST00000431058 377 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLPTM1O96005 DNAJC19P4-201ENST00000440115 345 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 RAC1P7-201ENST00000445367 377 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC079448.1-201ENST00000449377 373 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.15□□□□□ -1.91
CLPTM1O96005 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC104619.4-201ENST00000510773 249 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.15□□□□□ -1.91
CLPTM1O96005 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPTM1O96005 DUXAP4-201ENST00000603046 613 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 AC006557.5-201ENST00000603126 811 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 XIAPP1-201ENST00000603162 600 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 AC121334.2-201ENST00000605387 271 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 AC009268.2-201ENST00000621925 457 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 AP003355.3-201ENST00000623465 114 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPTM1O96005 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPTM1O96005 AC068137.3-201ENST00000639191 341 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 AC073869.6-201ENST00000640656 341 ntBASIC3.15□□□□□ -1.91
CLPTM1O96005 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLPTM1O96005 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.15□□□□□ -1.91
CLPTM1O96005 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
CLPTM1O96005 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
CLPTM1O96005 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLPTM1O96005 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CLPTM1O96005 RNU6-1078P-201ENST00000364522 103 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 MIR19A-201ENST00000384878 82 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 MIR200C-201ENST00000384980 68 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 RNA5SP44-201ENST00000410446 133 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.14□□□□□ -1.91
CLPTM1O96005 SSXP9-201ENST00000417503 292 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC245054.1-201ENST00000420944 258 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AC007283.2-201ENST00000424739 197 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.14□□□□□ -1.91
CLPTM1O96005 RABEPKP1-201ENST00000440529 1026 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.14□□□□□ -1.91
CLPTM1O96005 RPS3AP17-201ENST00000472594 777 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 RBM43P1-201ENST00000476891 1081 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLPTM1O96005 RPL9P6-201ENST00000492764 598 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC107401.1-201ENST00000503426 685 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AC091133.4-201ENST00000511142 308 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.14□□□□□ -1.91
CLPTM1O96005 MTND1P5-201ENST00000517906 940 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 MTCO2P4-201ENST00000517968 247 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.14□□□□□ -1.91
CLPTM1O96005 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AL133271.1-201ENST00000538229 291 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.14□□□□□ -1.91
CLPTM1O96005 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AC087883.1-201ENST00000551882 391 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AC027807.1-201ENST00000559921 996 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 MIR3682-201ENST00000581338 84 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 AC072046.2-201ENST00000618366 268 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.14□□□□□ -1.91
CLPTM1O96005 AL034408.1-202ENST00000636088 415 ntBASIC3.14□□□□□ -1.91
CLPTM1O96005 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLPTM1O96005 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms