Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5□□□□□ -1.61
RAPGEF3O95398 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 RNU6-1097P-201ENST00000363586 107 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 RNU6-108P-201ENST00000365558 107 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AL445529.1-201ENST00000398713 389 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 MRPS18BP2-201ENST00000434310 759 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 FTH1P1-201ENST00000437933 532 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 ANP32BP2-201ENST00000454525 545 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 RNU7-59P-201ENST00000459101 61 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 CR383656.7-201ENST00000548164 174 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 AL031176.1-201ENST00000604554 466 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AP001330.5-201ENST00000607176 411 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC007038.2-201ENST00000608095 740 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC002553.4-201ENST00000616896 331 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC022306.2-201ENST00000617563 647 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC112204.3-201ENST00000623822 332 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 AC005609.4-201ENST00000625071 447 ntBASIC4.99□□□□□ -1.61
RAPGEF3O95398 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.99□□□□□ -1.61
RAPGEF3O95398 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RAPGEF3O95398 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 ZNF826P-207ENST00000622273 1910 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 RNU4-82P-201ENST00000362443 140 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 RNU6-169P-201ENST00000365336 107 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 SNORA54-201ENST00000384281 123 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 USP9YP6-201ENST00000413550 854 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 USP9YP27-201ENST00000418455 438 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 ELOCP14-201ENST00000428070 331 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 ELOCP7-201ENST00000439968 331 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC108938.1-201ENST00000451204 136 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC027673.1-201ENST00000456245 405 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC022364.2-201ENST00000457963 554 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 RNU6-237P-201ENST00000515985 71 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 AK6P1-201ENST00000540219 478 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 UBL5P2-201ENST00000583788 219 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.98□□□□□ -1.61
RAPGEF3O95398 RNA5SP108-201ENST00000605921 117 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 AC245517.5-201ENST00000611529 162 ntBASIC4.98□□□□□ -1.61
RAPGEF3O95398 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAPGEF3O95398 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AL136360.1-201ENST00000503377 1900 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAPGEF3O95398 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAPGEF3O95398 Y_RNA.159-201ENST00000363674 87 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 RNY3P14-201ENST00000384309 102 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 RNU6-278P-201ENST00000390945 109 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 RNU6-837P-201ENST00000391056 108 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 FGF7P8-201ENST00000402994 292 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 Z99755.1-201ENST00000414048 380 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 MTATP6P18-201ENST00000417994 673 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 GPR143P-201ENST00000434155 205 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 RPL35AP22-201ENST00000436855 335 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC079781.2-201ENST00000446424 169 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC011979.2-201ENST00000527568 352 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AP000857.1-201ENST00000532151 543 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AL359212.1-201ENST00000556608 614 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC006254.3-201ENST00000603353 884 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AP000907.4-201ENST00000604143 237 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC004067.1-201ENST00000608733 700 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.97□□□□□ -1.61
RAPGEF3O95398 AC099654.14-201ENST00000638599 341 ntBASIC4.97□□□□□ -1.61
RAPGEF3O95398 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms