Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN3O95197 HMGB1P14-201ENST00000557424 591 ntBASIC3.57□□□□□ -1.84
RTN3O95197 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN3O95197 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTN3O95197 HSPE1P7-201ENST00000604681 321 ntBASIC3.57□□□□□ -1.84
RTN3O95197 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN3O95197 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN3O95197 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN3O95197 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RTN3O95197 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.57□□□□□ -1.84
RTN3O95197 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN3O95197 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN3O95197 AC073346.2-201ENST00000624724 2058 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AL049641.1-201ENST00000441055 1948 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
RTN3O95197 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTN3O95197 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTN3O95197 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN3O95197 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN3O95197 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN3O95197 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTN3O95197 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN3O95197 MIR1302-8-201ENST00000408342 128 ntBASIC3.56□□□□□ -1.84
RTN3O95197 BX323014.1-201ENST00000412876 237 ntBASIC3.56□□□□□ -1.84
RTN3O95197 Z85995.1-201ENST00000415547 335 ntBASIC3.56□□□□□ -1.84
RTN3O95197 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN3O95197 SDCBPP3-201ENST00000419629 891 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN3O95197 AL353705.1-201ENST00000433468 480 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AL512844.2-201ENST00000433990 593 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN3O95197 MTND1P28-201ENST00000435623 950 ntBASIC3.56□□□□□ -1.84
RTN3O95197 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN3O95197 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN3O95197 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
RTN3O95197 RNU6-420P-201ENST00000458780 107 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN3O95197 RN7SL807P-201ENST00000470923 297 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN3O95197 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN3O95197 MTND5P13-201ENST00000513046 1079 ntBASIC3.56□□□□□ -1.84
RTN3O95197 RNA5SP385-201ENST00000515947 110 ntBASIC3.56□□□□□ -1.84
RTN3O95197 RNU6-1282P-201ENST00000516735 96 ntBASIC3.56□□□□□ -1.84
RTN3O95197 SNORA70.24-201ENST00000517233 118 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AL356057.1-201ENST00000533798 831 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN3O95197 TRAV28-201ENST00000557548 323 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AC012414.6-201ENST00000568241 401 ntBASIC3.56□□□□□ -1.84
RTN3O95197 MIR3609-201ENST00000582661 80 ntBASIC3.56□□□□□ -1.84
RTN3O95197 MIR4276-201ENST00000584832 70 ntBASIC3.56□□□□□ -1.84
RTN3O95197 HMGN1P30-201ENST00000589286 268 ntBASIC3.56□□□□□ -1.84
RTN3O95197 CKS1BP3-201ENST00000600888 237 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AC025594.3-201ENST00000613068 790 ntBASIC3.56□□□□□ -1.84
RTN3O95197 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN3O95197 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RTN3O95197 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN3O95197 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN3O95197 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
RTN3O95197 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RTN3O95197 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RTN3O95197 MTND5P7-201ENST00000413558 1798 ntBASIC3.56□□□□□ -1.84
RTN3O95197 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN3O95197 OR1S2-201ENST00000302592 978 ntBASIC3.55□□□□□ -1.84
RTN3O95197 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTN3O95197 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
RTN3O95197 SNORD116-2-201ENST00000384274 95 ntBASIC3.55□□□□□ -1.84
RTN3O95197 SNORD116-6-201ENST00000384711 96 ntBASIC3.55□□□□□ -1.84
RTN3O95197 MIR325-201ENST00000385260 98 ntBASIC3.55□□□□□ -1.84
RTN3O95197 RNU2-33P-201ENST00000410344 192 ntBASIC3.55□□□□□ -1.84
RTN3O95197 RNA5SP120-201ENST00000410900 112 ntBASIC3.55□□□□□ -1.84
RTN3O95197 HMGN1P14-201ENST00000412459 517 ntBASIC3.55□□□□□ -1.84
RTN3O95197 Z99755.1-201ENST00000414048 380 ntBASIC3.55□□□□□ -1.84
RTN3O95197 RPS15AP12-201ENST00000419498 388 ntBASIC3.55□□□□□ -1.84
RTN3O95197 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.55□□□□□ -1.84
RTN3O95197 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AC005326.1-201ENST00000429197 123 ntBASIC3.55□□□□□ -1.84
RTN3O95197 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.55□□□□□ -1.84
RTN3O95197 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
RTN3O95197 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.55□□□□□ -1.84
RTN3O95197 Z82210.1-201ENST00000440037 231 ntBASIC3.55□□□□□ -1.84
RTN3O95197 Z83846.1-201ENST00000446798 265 ntBASIC3.55□□□□□ -1.84
RTN3O95197 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.55□□□□□ -1.84
RTN3O95197 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.55□□□□□ -1.84
RTN3O95197 RPL21P13-201ENST00000488305 481 ntBASIC3.55□□□□□ -1.84
RTN3O95197 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.55□□□□□ -1.84
RTN3O95197 RNU6-927P-201ENST00000516199 100 ntBASIC3.55□□□□□ -1.84
RTN3O95197 RN7SKP258-201ENST00000517151 304 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AP003181.2-201ENST00000528941 181 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AP003122.4-201ENST00000530980 758 ntBASIC3.55□□□□□ -1.84
RTN3O95197 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.55□□□□□ -1.84
RTN3O95197 AC009977.1-201ENST00000586015 570 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AC067852.3-201ENST00000589177 561 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AC239868.4-201ENST00000608318 671 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AL158063.1-201ENST00000615349 536 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AC006338.1-201ENST00000618453 749 ntBASIC3.55□□□□□ -1.84
RTN3O95197 Z69908.1-201ENST00000622603 247 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AL603839.4-201ENST00000624658 1005 ntBASIC3.55□□□□□ -1.84
RTN3O95197 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.55□□□□□ -1.84
RTN3O95197 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN3O95197 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms