Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-2O95096 NANOGNBP1-201ENST00000448444 480 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 RAB9AP1-201ENST00000449393 573 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX2-2O95096 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NKX2-2O95096 AC007182.2-201ENST00000489251 402 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AC022880.1-201ENST00000534017 973 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.27□□□□□ -1.89
NKX2-2O95096 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-2O95096 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.27□□□□□ -1.89
NKX2-2O95096 EIF1P4-201ENST00000572664 335 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AL022154.1-201ENST00000604698 785 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AC007363.1-201ENST00000604736 620 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AC103710.3-201ENST00000608157 948 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AL365204.3-201ENST00000612448 685 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 MIR6076-201ENST00000617521 113 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AL589994.2-201ENST00000621124 579 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AC138649.3-201ENST00000622154 254 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX2-2O95096 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NKX2-2O95096 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
NKX2-2O95096 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-2O95096 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
NKX2-2O95096 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
NKX2-2O95096 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-2O95096 FRG1CP-201ENST00000358464 769 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 Y_RNA.296-201ENST00000364930 108 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 SNORA5A-201ENST00000384111 134 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AL356967.1-201ENST00000406305 431 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 RNU2-39P-201ENST00000410604 198 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.26□□□□□ -1.89
NKX2-2O95096 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-2O95096 RPL30P2-201ENST00000414021 291 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 SYF2P2-201ENST00000417620 583 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 DBIP2-201ENST00000419076 262 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-2O95096 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX2-2O95096 AC093106.2-201ENST00000428212 385 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-2O95096 AC092573.2-201ENST00000434546 243 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 Z82210.1-201ENST00000440037 231 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 BNIP3P2-201ENST00000441221 577 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 NEFMP1-201ENST00000443423 1006 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX2-2O95096 RPL23AP62-201ENST00000463396 453 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AL135752.1-201ENST00000479477 471 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 RPL32P34-201ENST00000486380 400 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 FCF1P3-201ENST00000496394 590 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 PCBP2P3-201ENST00000509726 843 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-2O95096 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-2O95096 RNU6-1282P-201ENST00000516735 96 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 RNA5SP291-201ENST00000517222 105 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-2O95096 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-2O95096 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX2-2O95096 NCAPGP2-201ENST00000557911 754 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC006130.2-201ENST00000586202 326 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC098848.2-201ENST00000588023 330 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC174048.1-201ENST00000603389 144 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC122108.2-201ENST00000611946 526 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NKX2-2O95096 U4.6-201ENST00000621618 127 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-2O95096 AC098679.4-201ENST00000624241 654 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX2-2O95096 LRRC77P-213ENST00000637727 880 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX2-2O95096 OTUD4P1-201ENST00000237841 3067 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 AL049641.1-201ENST00000441055 1948 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX2-2O95096 AF117829.1-206ENST00000621883 3802 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 MTND5P29-201ENST00000458676 1807 ntBASIC3.26□□□□□ -1.89
NKX2-2O95096 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
NKX2-2O95096 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC022336.2-201ENST00000568966 2538 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-2O95096 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
NKX2-2O95096 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 MIR423-201ENST00000362201 94 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 Y_RNA.41-201ENST00000362646 102 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AL359837.1-201ENST00000381357 287 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 RNU6-946P-201ENST00000383878 107 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 RNU6-74P-201ENST00000384235 107 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 RHEBP3-201ENST00000411920 351 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC017079.2-201ENST00000416102 485 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC092047.1-201ENST00000424997 240 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC104651.1-201ENST00000427559 735 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AL158071.1-201ENST00000430315 461 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 RPL23AP69-201ENST00000431134 458 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 RPS20P5-201ENST00000434808 360 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 SETP5-201ENST00000437270 562 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms