Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.34□□□□□ -1.87
BEST1O76090 AC105129.3-201ENST00000605455 485 ntBASIC3.34□□□□□ -1.87
BEST1O76090 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST1O76090 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST1O76090 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST1O76090 AC091903.1-201ENST00000624322 454 ntBASIC3.34□□□□□ -1.87
BEST1O76090 AC019226.2-201ENST00000625973 424 ntBASIC3.34□□□□□ -1.87
BEST1O76090 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.34□□□□□ -1.87
BEST1O76090 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
BEST1O76090 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
BEST1O76090 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.34□□□□□ -1.87
BEST1O76090 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
BEST1O76090 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.88
BEST1O76090 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST1O76090 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST1O76090 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST1O76090 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST1O76090 RNY3P13-201ENST00000365542 102 ntBASIC3.33□□□□□ -1.88
BEST1O76090 RNU6-217P-201ENST00000384164 104 ntBASIC3.33□□□□□ -1.88
BEST1O76090 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
BEST1O76090 USP9YP13-201ENST00000417797 480 ntBASIC3.33□□□□□ -1.88
BEST1O76090 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST1O76090 AC093156.1-201ENST00000440382 670 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST1O76090 ELOCP23-201ENST00000452014 332 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.33□□□□□ -1.88
BEST1O76090 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST1O76090 HMGN1P18-201ENST00000457642 277 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC004801.2-202ENST00000463559 283 ntBASIC3.33□□□□□ -1.88
BEST1O76090 DSTNP2-201ENST00000504533 515 ntBASIC3.33□□□□□ -1.88
BEST1O76090 MTND4LP22-201ENST00000508209 276 ntBASIC3.33□□□□□ -1.88
BEST1O76090 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.33□□□□□ -1.88
BEST1O76090 SNORA74D-201ENST00000516404 141 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
BEST1O76090 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST1O76090 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.33□□□□□ -1.88
BEST1O76090 MTND3P12-201ENST00000559068 328 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC138749.5-201ENST00000611461 208 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AL592295.2-201ENST00000612578 206 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC116165.2-201ENST00000616705 206 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC104010.1-201ENST00000616889 150 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC009878.1-201ENST00000621819 340 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
BEST1O76090 AC007494.3-201ENST00000624660 743 ntBASIC3.33□□□□□ -1.88
BEST1O76090 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST1O76090 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST1O76090 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST1O76090 MTND4P4-201ENST00000439033 1366 ntBASIC3.33□□□□□ -1.88
BEST1O76090 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.33□□□□□ -1.88
BEST1O76090 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
BEST1O76090 AC092104.1-201ENST00000497346 1441 ntBASIC3.33□□□□□ -1.88
BEST1O76090 ZNF833P-201ENST00000424938 1494 ntBASIC3.33□□□□□ -1.88
BEST1O76090 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.33□□□□□ -1.88
BEST1O76090 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
BEST1O76090 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST1O76090 AC091564.4-201ENST00000533934 2194 ntBASIC3.32□□□□□ -1.88
BEST1O76090 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST1O76090 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.32□□□□□ -1.88
BEST1O76090 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
BEST1O76090 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
BEST1O76090 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST1O76090 RNU6-198P-201ENST00000384258 104 ntBASIC3.32□□□□□ -1.88
BEST1O76090 SNORA48.2-201ENST00000390926 124 ntBASIC3.32□□□□□ -1.88
BEST1O76090 SAR1AP2-201ENST00000392696 594 ntBASIC3.32□□□□□ -1.88
BEST1O76090 EI24P2-201ENST00000397776 1076 ntBASIC3.32□□□□□ -1.88
BEST1O76090 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST1O76090 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 ISCA1P2-201ENST00000438679 421 ntBASIC3.32□□□□□ -1.88
BEST1O76090 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST1O76090 UBE2D3P4-201ENST00000441973 436 ntBASIC3.32□□□□□ -1.88
BEST1O76090 USP9YP12-201ENST00000450481 570 ntBASIC3.32□□□□□ -1.88
BEST1O76090 SNRPFP4-201ENST00000456366 242 ntBASIC3.32□□□□□ -1.88
BEST1O76090 snoU13.28-201ENST00000459235 104 ntBASIC3.32□□□□□ -1.88
BEST1O76090 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 AC114797.1-201ENST00000514003 728 ntBASIC3.32□□□□□ -1.88
BEST1O76090 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
BEST1O76090 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST1O76090 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST1O76090 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.32□□□□□ -1.88
BEST1O76090 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST1O76090 AL133393.1-201ENST00000603277 287 ntBASIC3.32□□□□□ -1.88
BEST1O76090 NUTF2P8-201ENST00000604593 363 ntBASIC3.32□□□□□ -1.88
BEST1O76090 RNU6-87P-201ENST00000607561 108 ntBASIC3.32□□□□□ -1.88
BEST1O76090 AL391813.2-201ENST00000609113 322 ntBASIC3.32□□□□□ -1.88
BEST1O76090 AC108747.1-201ENST00000609508 535 ntBASIC3.32□□□□□ -1.88
BEST1O76090 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
BEST1O76090 BX664608.1-201ENST00000610519 487 ntBASIC3.32□□□□□ -1.88
BEST1O76090 AL161629.2-201ENST00000615347 275 ntBASIC3.32□□□□□ -1.88
BEST1O76090 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
BEST1O76090 AC008147.4-201ENST00000617570 1204 ntBASIC3.32□□□□□ -1.88
BEST1O76090 Z99129.2-201ENST00000619967 314 ntBASIC3.32□□□□□ -1.88
BEST1O76090 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
BEST1O76090 FRG1KP-201ENST00000623592 341 ntBASIC3.32□□□□□ -1.88
BEST1O76090 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms