Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-777P-201ENST00000364265 104 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
UPK1BO75841 OR5H15-201ENST00000383696 930 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 RNU6-1257P-201ENST00000384625 110 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 ATP5F1P3-201ENST00000397213 657 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 MIR1284-201ENST00000408337 120 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL513331.1-201ENST00000411908 397 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL592148.1-201ENST00000413568 445 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 BTF3L4P3-201ENST00000418879 476 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL953862.1-201ENST00000423016 168 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 ZYG11AP1-201ENST00000430329 837 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 HMGN2P31-201ENST00000432430 273 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 NANOGP2-201ENST00000435391 727 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UPK1BO75841 PGBD4P3-201ENST00000440731 581 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 RPS24P13-201ENST00000442520 397 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 MTCO2P25-201ENST00000447065 681 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 RPS15AP36-201ENST00000492022 382 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
UPK1BO75841 AC091163.3-201ENST00000518269 1144 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1BO75841 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1BO75841 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1BO75841 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.04□□□□□ -2.08
UPK1BO75841 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1BO75841 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.04□□□□□ -2.08
UPK1BO75841 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1BO75841 AL356280.1-201ENST00000603614 379 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AC131235.4-201ENST00000609288 620 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 PART1_2.1-201ENST00000612397 250 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL359693.1-201ENST00000614959 2407 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 MIR7112-201ENST00000616126 65 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL121895.2-201ENST00000619558 447 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AL390862.1-201ENST00000635467 1469 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 AC106858.1-201ENST00000637497 429 ntBASIC2.04□□□□□ -2.08
UPK1BO75841 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UPK1BO75841 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
UPK1BO75841 AC011477.1-204ENST00000623416 1325 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UPK1BO75841 RNU6-432P-201ENST00000384196 109 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.03□□□□□ -2.08
UPK1BO75841 SNORA11B-201ENST00000408175 129 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 RN7SKP27-201ENST00000410684 333 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.03□□□□□ -2.08
UPK1BO75841 MTCO3P30-201ENST00000426425 670 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC010153.1-201ENST00000432862 727 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.03□□□□□ -2.08
UPK1BO75841 MTND1P16-201ENST00000465177 898 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC090515.1-201ENST00000465295 476 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AL121769.1-201ENST00000469473 401 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC104563.1-201ENST00000476147 376 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC104982.1-201ENST00000478775 574 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 LINC00888-204ENST00000487386 421 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC098591.2-201ENST00000510152 315 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.03□□□□□ -2.08
UPK1BO75841 RNU1-45P-201ENST00000517191 141 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1BO75841 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1BO75841 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1BO75841 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.03□□□□□ -2.08
UPK1BO75841 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1BO75841 VN1R92P-201ENST00000598511 928 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC006539.2-201ENST00000601729 572 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.03□□□□□ -2.08
UPK1BO75841 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1BO75841 AL357094.1-201ENST00000603845 844 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
UPK1BO75841 MIR6810-201ENST00000622701 70 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AL138955.1-201ENST00000622881 1040 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AL356863.1-201ENST00000623378 1080 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AL138960.2-201ENST00000625145 535 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC116618.1-201ENST00000634617 774 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 AC012442.3-202ENST00000636742 206 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.03□□□□□ -2.08
UPK1BO75841 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
UPK1BO75841 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK1BO75841 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
UPK1BO75841 AC080128.1-201ENST00000474389 1917 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 RNU6-560P-201ENST00000364007 108 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 SNORA18.3-201ENST00000384122 132 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 MIR200C-201ENST00000384980 68 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 RNU6-1000P-201ENST00000391066 106 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 MIR888-201ENST00000401186 77 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 AL590084.2-201ENST00000401481 382 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 AC007064.1-201ENST00000412238 351 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1BO75841 USP9YP11-201ENST00000427537 717 ntBASIC2.02□□□□□ -2.09
UPK1BO75841 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK1BO75841 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK1BO75841 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1BO75841 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms