Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF40AO75400 MTCO1P12-201ENST00000414273 1543 ntBASIC5.15□□□□□ -1.58
PRPF40AO75400 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF40AO75400 RNA5SP443-201ENST00000363083 132 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 Y_RNA.146-201ENST00000363549 102 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 SNORD74.4-201ENST00000364129 80 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 RNVU1-6-201ENST00000364688 164 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF40AO75400 RNU6-128P-201ENST00000383976 107 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 Y_RNA.482-201ENST00000384377 111 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 RNU6-45P-201ENST00000384471 107 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 RNU6-601P-201ENST00000384540 107 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 Z98745.1-201ENST00000402553 494 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 LAP3P1-201ENST00000403648 294 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 Y_RNA.625-201ENST00000411256 107 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 AL513331.1-201ENST00000411908 397 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF40AO75400 MTND2P23-201ENST00000422990 651 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
PRPF40AO75400 AC016831.4-201ENST00000438302 307 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 RPL32P28-201ENST00000443577 397 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 Y_RNA.653-201ENST00000459091 95 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 AC130509.1-201ENST00000464158 433 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF40AO75400 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF40AO75400 AC007016.1-201ENST00000512110 244 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 RNU6-1069P-201ENST00000516612 133 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 CYCSP27-201ENST00000527643 293 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF40AO75400 RPL23AP97-201ENST00000568955 471 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 AC006270.2-201ENST00000578523 652 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 MIR5692A1-201ENST00000580523 69 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 AC006504.6-201ENST00000590142 199 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 AC002545.1-201ENST00000592511 181 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF40AO75400 AL080274.1-201ENST00000605565 220 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 FAM157A-202ENST00000615155 405 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 AC133104.2-201ENST00000615272 193 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 RN7SL722P-201ENST00000617780 284 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 RN7SL565P-201ENST00000618246 284 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 U3.53-201ENST00000628922 216 ntBASIC5.15□□□□□ -1.59
PRPF40AO75400 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF40AO75400 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF40AO75400 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF40AO75400 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF40AO75400 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF40AO75400 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PRPF40AO75400 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.14□□□□□ -1.59
PRPF40AO75400 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 MAPK10-253ENST00000641010 4072 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 Y_RNA.135-201ENST00000363439 95 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PRPF40AO75400 Y_RNA.445-201ENST00000384168 102 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 RNU6-1181P-201ENST00000384191 106 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 AL590139.1-201ENST00000416267 400 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.14□□□□□ -1.59
PRPF40AO75400 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF40AO75400 AC012671.1-201ENST00000451912 203 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 AC104472.2-201ENST00000469035 601 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 AC092451.1-201ENST00000480211 153 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PRPF40AO75400 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF40AO75400 AC002456.2-201ENST00000509356 380 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 RNU6-927P-201ENST00000516199 100 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 RNU6-1045P-201ENST00000516321 107 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 RNU6-1332P-201ENST00000516666 104 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 RNU6-914P-201ENST00000516749 109 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF40AO75400 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.14□□□□□ -1.59
PRPF40AO75400 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF40AO75400 MIR4330-201ENST00000579077 105 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 AC012119.1-201ENST00000603184 222 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 CYP2C61P-201ENST00000604072 290 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 ATP5A1P2-202ENST00000616464 443 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 AC010378.1-201ENST00000619270 362 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PRPF40AO75400 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PRPF40AO75400 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF40AO75400 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PRPF40AO75400 CPHL1P-201ENST00000461341 3407 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 A2MP1-204ENST00000566278 4130 ntBASIC5.14□□□□□ -1.59
PRPF40AO75400 ZNF962P-201ENST00000443465 3140 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
PRPF40AO75400 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF40AO75400 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
PRPF40AO75400 AC021146.4-201ENST00000309229 279 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 Y_RNA.202-201ENST00000364083 110 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PRPF40AO75400 SNORA56-201ENST00000383966 129 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 RNU6-474P-201ENST00000384243 107 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 RPL5P18-201ENST00000406671 891 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF40AO75400 SKA2P1-201ENST00000425592 390 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms