Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.25□□□□□ -1.89
CACNA1FO60840 OR4G1P-201ENST00000588632 938 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 AC007998.5-201ENST00000622938 237 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC073348.1-201ENST00000623002 331 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MIR4496-201ENST00000635896 61 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CACNA1FO60840 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CACNA1FO60840 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CACNA1FO60840 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CACNA1FO60840 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.24□□□□□ -1.89
CACNA1FO60840 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CACNA1FO60840 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.24□□□□□ -1.89
CACNA1FO60840 RPL9P7-201ENST00000330965 580 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 Y_RNA.88-201ENST00000363029 99 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 RNU6-492P-201ENST00000363035 104 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 SNORA48.8-201ENST00000391324 134 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 EIF5P1-201ENST00000400019 1231 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 RPS12P2-201ENST00000439728 269 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 EEF1E1P1-201ENST00000446998 430 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 VN1R10P-201ENST00000447106 875 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.24□□□□□ -1.89
CACNA1FO60840 TPT1P7-201ENST00000458300 517 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 RNA5SP269-201ENST00000459032 137 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 RPL31P50-201ENST00000471002 296 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AC004924.1-201ENST00000480160 781 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AL035404.1-201ENST00000497982 568 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 RPL7L1P13-201ENST00000511702 739 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.24□□□□□ -1.89
CACNA1FO60840 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.24□□□□□ -1.89
CACNA1FO60840 AC022878.1-201ENST00000530684 149 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.24□□□□□ -1.89
CACNA1FO60840 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.24□□□□□ -1.89
CACNA1FO60840 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CACNA1FO60840 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.24□□□□□ -1.89
CACNA1FO60840 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.24□□□□□ -1.89
CACNA1FO60840 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.24□□□□□ -1.89
CACNA1FO60840 AC006270.2-201ENST00000578523 652 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.24□□□□□ -1.89
CACNA1FO60840 AC006566.1-201ENST00000608943 513 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.24□□□□□ -1.89
CACNA1FO60840 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AC072046.2-201ENST00000618366 268 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AC018926.3-201ENST00000618841 406 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 AC124864.2-201ENST00000624736 186 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 OR5AK4P-201ENST00000635912 903 ntBASIC3.24□□□□□ -1.89
CACNA1FO60840 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CACNA1FO60840 AL512646.1-201ENST00000269395 1077 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 RPL23AP29-201ENST00000397284 453 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 SNORD88.1-201ENST00000408684 91 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC109780.2-201ENST00000413467 845 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AL356583.2-201ENST00000426536 280 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 ZNF863P-201ENST00000426746 417 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.23□□□□□ -1.89
CACNA1FO60840 FCF1P1-201ENST00000432690 571 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.23□□□□□ -1.89
CACNA1FO60840 AL033528.1-201ENST00000453780 140 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.23□□□□□ -1.89
CACNA1FO60840 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.23□□□□□ -1.89
CACNA1FO60840 RNU6-718P-201ENST00000516166 105 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 RPL7P20-201ENST00000520308 745 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC008562.1-201ENST00000521763 330 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC091489.2-201ENST00000566263 604 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC010653.1-201ENST00000571108 881 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AP001004.1-201ENST00000582468 324 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 SEPT7P9-203ENST00000604116 343 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC069304.2-201ENST00000605154 435 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC126118.1-201ENST00000607744 628 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC107214.2-201ENST00000608204 634 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CACNA1FO60840 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.23□□□□□ -1.89
CACNA1FO60840 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CACNA1FO60840 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CACNA1FO60840 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.23□□□□□ -1.89
CACNA1FO60840 CDR1-202ENST00000625883 1485 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CACNA1FO60840 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.23□□□□□ -1.89
CACNA1FO60840 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CACNA1FO60840 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CACNA1FO60840 RNU6-251P-201ENST00000363235 104 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 Y_RNA.248-201ENST00000364501 109 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 PIGPP2-201ENST00000411569 458 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC092832.1-201ENST00000422934 400 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC007742.1-201ENST00000425789 329 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 RPS25P9-201ENST00000435591 252 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 MTND1P28-201ENST00000435623 950 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 ELOCP26-201ENST00000436067 329 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AL592447.1-201ENST00000447592 540 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.23□□□□□ -1.89
CACNA1FO60840 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.23□□□□□ -1.89
CACNA1FO60840 MTCYBP17-201ENST00000503579 789 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 MTCYBP43-201ENST00000513621 740 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 MTND5P4-201ENST00000514978 288 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 MTCO2P4-201ENST00000517968 247 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.23□□□□□ -1.89
CACNA1FO60840 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.23□□□□□ -1.89
CACNA1FO60840 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms