Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU2-46P-201ENST00000517038 113 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC093012.1-202ENST00000549403 582 ntBASIC3.01□□□□□ -1.93
SNX3O60493 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX3O60493 AC005771.1-201ENST00000585581 349 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC078899.3-201ENST00000599065 212 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX3O60493 AC119751.7-201ENST00000600494 245 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AL358072.1-201ENST00000604156 575 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC103710.2-201ENST00000609912 942 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC091304.9-201ENST00000612091 226 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AL020991.1-201ENST00000612314 373 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC100793.4-201ENST00000613683 429 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC108479.2-201ENST00000617314 601 ntBASIC3.01□□□□□ -1.93
SNX3O60493 AC027309.3-201ENST00000623419 351 ntBASIC3.01□□□□□ -1.93
SNX3O60493 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SNX3O60493 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNX3O60493 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNX3O60493 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX3O60493 AC118273.1-201ENST00000525324 3006 ntBASIC3□□□□□ -1.93
SNX3O60493 MIR325-201ENST00000385260 98 ntBASIC3□□□□□ -1.93
SNX3O60493 MRPL42P2-201ENST00000403169 426 ntBASIC3□□□□□ -1.93
SNX3O60493 RPL5P18-201ENST00000406671 891 ntBASIC3□□□□□ -1.93
SNX3O60493 AL513331.1-201ENST00000411908 397 ntBASIC3□□□□□ -1.93
SNX3O60493 SEPT2P1-201ENST00000419651 180 ntBASIC3□□□□□ -1.93
SNX3O60493 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3□□□□□ -1.93
SNX3O60493 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3□□□□□ -1.93
SNX3O60493 AL590383.1-201ENST00000428602 75 ntBASIC3□□□□□ -1.93
SNX3O60493 FCF1P1-201ENST00000432690 571 ntBASIC3□□□□□ -1.93
SNX3O60493 MTND4P32-201ENST00000437189 1237 ntBASIC3□□□□□ -1.93
SNX3O60493 USP9YP29-201ENST00000445112 563 ntBASIC3□□□□□ -1.93
SNX3O60493 CBWD4P-201ENST00000445695 655 ntBASIC3□□□□□ -1.93
SNX3O60493 AL360221.1-201ENST00000445989 335 ntBASIC3□□□□□ -1.93
SNX3O60493 AC020550.1-201ENST00000447385 163 ntBASIC3□□□□□ -1.93
SNX3O60493 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3□□□□□ -1.93
SNX3O60493 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3□□□□□ -1.93
SNX3O60493 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNX3O60493 MTND1P12-201ENST00000455231 147 ntBASIC3□□□□□ -1.93
SNX3O60493 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3□□□□□ -1.93
SNX3O60493 SNORD42A-201ENST00000459584 64 ntBASIC3□□□□□ -1.93
SNX3O60493 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3□□□□□ -1.93
SNX3O60493 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3□□□□□ -1.93
SNX3O60493 RN7SL132P-201ENST00000478131 296 ntBASIC3□□□□□ -1.93
SNX3O60493 RAP1BP2-201ENST00000478270 544 ntBASIC3□□□□□ -1.93
SNX3O60493 LARP1BP2-201ENST00000486594 519 ntBASIC3□□□□□ -1.93
SNX3O60493 RPL30P5-201ENST00000494923 336 ntBASIC3□□□□□ -1.93
SNX3O60493 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3□□□□□ -1.93
SNX3O60493 AC010587.1-201ENST00000505809 469 ntBASIC3□□□□□ -1.93
SNX3O60493 Y_RNA.672-201ENST00000516289 104 ntBASIC3□□□□□ -1.93
SNX3O60493 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3□□□□□ -1.93
SNX3O60493 RPL21P12-201ENST00000559810 515 ntBASIC3□□□□□ -1.93
SNX3O60493 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3□□□□□ -1.93
SNX3O60493 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3□□□□□ -1.93
SNX3O60493 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
SNX3O60493 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNX3O60493 MIR4276-201ENST00000584832 70 ntBASIC3□□□□□ -1.93
SNX3O60493 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3□□□□□ -1.93
SNX3O60493 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3□□□□□ -1.93
SNX3O60493 DPPA3P3-201ENST00000603842 430 ntBASIC3□□□□□ -1.93
SNX3O60493 SEPT7P9-203ENST00000604116 343 ntBASIC3□□□□□ -1.93
SNX3O60493 AC073657.2-201ENST00000605661 303 ntBASIC3□□□□□ -1.93
SNX3O60493 AC131902.3-201ENST00000611767 581 ntBASIC3□□□□□ -1.93
SNX3O60493 MIR6076-201ENST00000617521 113 ntBASIC3□□□□□ -1.93
SNX3O60493 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNX3O60493 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
SNX3O60493 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3□□□□□ -1.93
SNX3O60493 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNX3O60493 TEX21P-201ENST00000447107 1476 ntBASIC2.99□□□□□ -1.93
SNX3O60493 GNG5P1-201ENST00000255500 204 ntBASIC2.99□□□□□ -1.93
SNX3O60493 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNX3O60493 RNU5E-1-201ENST00000362477 120 ntBASIC2.99□□□□□ -1.93
SNX3O60493 RNU6-1284P-201ENST00000363701 100 ntBASIC2.99□□□□□ -1.93
SNX3O60493 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNX3O60493 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNX3O60493 RNA5SP38-201ENST00000410750 119 ntBASIC2.99□□□□□ -1.93
SNX3O60493 Z85995.1-201ENST00000415547 335 ntBASIC2.99□□□□□ -1.93
SNX3O60493 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX3O60493 AC007283.2-201ENST00000424739 197 ntBASIC2.99□□□□□ -1.93
SNX3O60493 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX3O60493 DPPA2P1-201ENST00000428060 556 ntBASIC2.99□□□□□ -1.93
SNX3O60493 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX3O60493 RPS29P7-201ENST00000439662 171 ntBASIC2.99□□□□□ -1.93
SNX3O60493 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX3O60493 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX3O60493 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX3O60493 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX3O60493 snoU109.1-201ENST00000459339 135 ntBASIC2.99□□□□□ -1.93
SNX3O60493 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX3O60493 RNA5SP337-201ENST00000517007 109 ntBASIC2.99□□□□□ -1.93
SNX3O60493 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX3O60493 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.99□□□□□ -1.93
SNX3O60493 ARL2BPP2-201ENST00000550907 489 ntBASIC2.99□□□□□ -1.93
SNX3O60493 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX3O60493 AC034105.3-201ENST00000565294 442 ntBASIC2.99□□□□□ -1.93
SNX3O60493 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX3O60493 AC002545.1-201ENST00000592511 181 ntBASIC2.99□□□□□ -1.93
SNX3O60493 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX3O60493 HSPE1P7-201ENST00000604681 321 ntBASIC2.99□□□□□ -1.93
SNX3O60493 AL390237.1-201ENST00000404226 1415 ntBASIC2.99□□□□□ -1.93
SNX3O60493 FAM35CP-201ENST00000554755 2470 ntBASIC2.99□□□□□ -1.93
SNX3O60493 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms