Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC026427.2-201ENST00000506228 536 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC104619.4-201ENST00000510773 249 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 RN7SKP18-201ENST00000516005 275 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.29□□□□□ -1.88
ZIC3O60481 RANP9-201ENST00000519957 271 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.29□□□□□ -1.88
ZIC3O60481 AP001646.1-201ENST00000527936 915 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.29□□□□□ -1.88
ZIC3O60481 AL133241.1-201ENST00000556832 487 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.29□□□□□ -1.88
ZIC3O60481 AC005951.2-201ENST00000576282 495 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC006504.3-201ENST00000586818 523 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 AC010133.1-201ENST00000615809 842 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.29□□□□□ -1.88
ZIC3O60481 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.29□□□□□ -1.88
ZIC3O60481 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZIC3O60481 AC007823.1-201ENST00000569932 1566 ntBASIC3.29□□□□□ -1.88
ZIC3O60481 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ZIC3O60481 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.29□□□□□ -1.88
ZIC3O60481 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZIC3O60481 FAM35DP-201ENST00000323387 2712 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZIC3O60481 MAPK10-373ENST00000641983 6772 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZIC3O60481 AC106871.1-201ENST00000568324 3102 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC073343.1-201ENST00000328239 651 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 RNU6-188P-201ENST00000364207 107 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 RNU4-48P-201ENST00000365559 182 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 Y_RNA.453-201ENST00000384223 109 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 RNU6-606P-201ENST00000384721 111 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 MIR454-201ENST00000390180 115 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ZIC3O60481 AMD1P2-201ENST00000412936 992 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.28□□□□□ -1.88
ZIC3O60481 MRPL50P2-201ENST00000416821 482 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 USP9YP27-201ENST00000418455 438 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 RAC1P6-201ENST00000423911 575 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.28□□□□□ -1.88
ZIC3O60481 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC091286.1-201ENST00000431233 461 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 RPL36AP6-201ENST00000435770 321 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 AL356010.1-201ENST00000456364 102 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 SNORD105B-201ENST00000458770 79 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 MTAPP1-201ENST00000489154 819 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.28□□□□□ -1.88
ZIC3O60481 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 RNU6-390P-201ENST00000516259 103 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 SNORA31.8-201ENST00000516327 108 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 OR5BN1P-201ENST00000532955 829 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.28□□□□□ -1.88
ZIC3O60481 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC024619.4-201ENST00000580924 316 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC010591.1-201ENST00000603941 649 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AP001330.4-201ENST00000604350 154 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC104458.1-201ENST00000608243 463 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC093788.1-201ENST00000609356 927 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 SDR42E1P2-201ENST00000614861 481 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC093648.1-201ENST00000623546 606 ntBASIC3.28□□□□□ -1.88
ZIC3O60481 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ZIC3O60481 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZIC3O60481 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZIC3O60481 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 AC093536.2-201ENST00000565257 1406 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 GABPAP-201ENST00000419271 1356 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 DEFB108F-201ENST00000344638 222 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 SNORA51.2-201ENST00000364595 132 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZIC3O60481 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.27□□□□□ -1.89
ZIC3O60481 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.27□□□□□ -1.89
ZIC3O60481 RNU6-641P-201ENST00000384006 107 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 RNU6-908P-201ENST00000410160 94 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.27□□□□□ -1.89
ZIC3O60481 OR51A5P-201ENST00000415429 942 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 RPL21P66-201ENST00000426566 466 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC008850.1-201ENST00000427546 362 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC093106.2-201ENST00000428212 385 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 DDX3P2-201ENST00000446138 111 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AC020550.1-201ENST00000447385 163 ntBASIC3.27□□□□□ -1.89
ZIC3O60481 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.27□□□□□ -1.89
ZIC3O60481 RN7SL93P-201ENST00000463035 293 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms