Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.18□□□□□ -1.9
SSX4O60224 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSX4O60224 AC128657.1-201ENST00000549459 145 ntBASIC3.18□□□□□ -1.9
SSX4O60224 ARL2BPP2-201ENST00000550907 489 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX4O60224 MIR3913-1-201ENST00000577744 102 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AC010591.1-201ENST00000603941 649 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AC013553.2-201ENST00000604244 589 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AL390240.1-201ENST00000612950 384 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AC100793.4-201ENST00000613683 429 ntBASIC3.18□□□□□ -1.9
SSX4O60224 AF117829.1-206ENST00000621883 3802 ntBASIC3.18□□□□□ -1.9
SSX4O60224 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.17□□□□□ -1.9
SSX4O60224 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.17□□□□□ -1.9
SSX4O60224 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSX4O60224 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSX4O60224 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
SSX4O60224 MIR148B-201ENST00000362252 99 ntBASIC3.17□□□□□ -1.9
SSX4O60224 U3.11-201ENST00000364476 212 ntBASIC3.17□□□□□ -1.9
SSX4O60224 RNU6-1197P-201ENST00000391183 107 ntBASIC3.17□□□□□ -1.9
SSX4O60224 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSX4O60224 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.17□□□□□ -1.9
SSX4O60224 AC127391.1-201ENST00000411737 98 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC017079.2-201ENST00000416102 485 ntBASIC3.17□□□□□ -1.9
SSX4O60224 C1DP2-201ENST00000418167 426 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AL451054.2-201ENST00000420896 202 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC245054.1-201ENST00000420944 258 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC091390.3-201ENST00000426478 338 ntBASIC3.17□□□□□ -1.9
SSX4O60224 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.17□□□□□ -1.9
SSX4O60224 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 AC073614.1-201ENST00000438690 650 ntBASIC3.17□□□□□ -1.9
SSX4O60224 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 SSXP4-201ENST00000451349 245 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
SSX4O60224 KLF3P2-201ENST00000465138 268 ntBASIC3.17□□□□□ -1.9
SSX4O60224 MTCO2P29-201ENST00000465212 189 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 AC026427.2-201ENST00000506228 536 ntBASIC3.17□□□□□ -1.9
SSX4O60224 TTC39CP1-201ENST00000512513 755 ntBASIC3.17□□□□□ -1.9
SSX4O60224 MTND3P5-201ENST00000512798 333 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.17□□□□□ -1.9
SSX4O60224 AC022690.1-201ENST00000526681 550 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 OR5B10P-201ENST00000532869 642 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.17□□□□□ -1.9
SSX4O60224 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.17□□□□□ -1.9
SSX4O60224 AC124947.2-202ENST00000552735 133 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC006960.3-201ENST00000561845 705 ntBASIC3.17□□□□□ -1.9
SSX4O60224 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.17□□□□□ -1.9
SSX4O60224 AC009570.1-201ENST00000609599 745 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AL133173.2-201ENST00000614270 90 ntBASIC3.17□□□□□ -1.9
SSX4O60224 AC022149.2-201ENST00000621061 203 ntBASIC3.17□□□□□ -1.9
SSX4O60224 U6.105-201ENST00000637379 88 ntBASIC3.17□□□□□ -1.9
SSX4O60224 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.17□□□□□ -1.9
SSX4O60224 AC119674.1-207ENST00000641355 633 ntBASIC3.17□□□□□ -1.9
SSX4O60224 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.17□□□□□ -1.9
SSX4O60224 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSX4O60224 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.17□□□□□ -1.9
SSX4O60224 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
SSX4O60224 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX4O60224 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSX4O60224 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSX4O60224 MTND5P1-201ENST00000445440 1375 ntBASIC3.16□□□□□ -1.9
SSX4O60224 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX4O60224 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSX4O60224 OR5J1P-201ENST00000313544 939 ntBASIC3.16□□□□□ -1.9
SSX4O60224 Y_RNA.194-201ENST00000363985 102 ntBASIC3.16□□□□□ -1.9
SSX4O60224 RNU6-1119P-201ENST00000384349 108 ntBASIC3.16□□□□□ -1.9
SSX4O60224 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSX4O60224 SOD2P1-201ENST00000396543 562 ntBASIC3.16□□□□□ -1.9
SSX4O60224 RNU2-36P-201ENST00000410361 191 ntBASIC3.16□□□□□ -1.9
SSX4O60224 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.16□□□□□ -1.9
SSX4O60224 AC007899.1-201ENST00000412776 775 ntBASIC3.16□□□□□ -1.9
SSX4O60224 ELOCP4-201ENST00000420090 333 ntBASIC3.16□□□□□ -1.9
SSX4O60224 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SSX4O60224 AC137499.1-201ENST00000427602 88 ntBASIC3.16□□□□□ -1.9
SSX4O60224 FCF1P1-201ENST00000432690 571 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC073063.1-201ENST00000434352 607 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC092573.2-201ENST00000434546 243 ntBASIC3.16□□□□□ -1.9
SSX4O60224 TAAR7P-201ENST00000436141 242 ntBASIC3.16□□□□□ -1.9
SSX4O60224 RPL23AP22-201ENST00000437556 453 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.16□□□□□ -1.9
SSX4O60224 AC020550.1-201ENST00000447385 163 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC006480.1-201ENST00000449887 378 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX4O60224 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.16□□□□□ -1.9
SSX4O60224 TPT1P7-201ENST00000458300 517 ntBASIC3.16□□□□□ -1.9
SSX4O60224 RBM43P1-201ENST00000476891 1081 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
SSX4O60224 CASP1P1-201ENST00000526345 212 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC011979.2-201ENST00000527568 352 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AL163153.1-201ENST00000554223 283 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC012213.3-201ENST00000577199 777 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.16□□□□□ -1.9
SSX4O60224 AC103987.3-201ENST00000582071 292 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms