Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDB2O43679 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB2O43679 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LDB2O43679 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LDB2O43679 MIR423-201ENST00000362201 94 ntBASIC3.5□□□□□ -1.85
LDB2O43679 RNU6-1120P-201ENST00000362988 108 ntBASIC3.5□□□□□ -1.85
LDB2O43679 RNU6-1155P-201ENST00000363554 107 ntBASIC3.5□□□□□ -1.85
LDB2O43679 RNY3P14-201ENST00000384309 102 ntBASIC3.5□□□□□ -1.85
LDB2O43679 MIR218-2-201ENST00000385006 110 ntBASIC3.5□□□□□ -1.85
LDB2O43679 RNU6-754P-201ENST00000391166 107 ntBASIC3.5□□□□□ -1.85
LDB2O43679 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB2O43679 RPS4XP8-201ENST00000402039 771 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AL583834.1-201ENST00000406943 343 ntBASIC3.5□□□□□ -1.85
LDB2O43679 RHEBP3-201ENST00000411920 351 ntBASIC3.5□□□□□ -1.85
LDB2O43679 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB2O43679 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB2O43679 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB2O43679 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB2O43679 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB2O43679 AL158071.1-201ENST00000430315 461 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AL357552.1-201ENST00000445254 415 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB2O43679 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB2O43679 RPL9P32-201ENST00000464118 620 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AL049714.1-201ENST00000466686 347 ntBASIC3.5□□□□□ -1.85
LDB2O43679 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB2O43679 AC135721.1-201ENST00000497954 479 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB2O43679 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB2O43679 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB2O43679 AC104383.1-201ENST00000530297 370 ntBASIC3.5□□□□□ -1.85
LDB2O43679 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.5□□□□□ -1.85
LDB2O43679 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.5□□□□□ -1.85
LDB2O43679 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB2O43679 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB2O43679 OR4K8P-201ENST00000578842 1048 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AC067852.3-201ENST00000589177 561 ntBASIC3.5□□□□□ -1.85
LDB2O43679 SRGNP1-201ENST00000603392 451 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AC007621.1-201ENST00000604544 437 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AP001596.2-201ENST00000608410 312 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AC093788.1-201ENST00000609356 927 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AC103710.2-201ENST00000609912 942 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AC093838.1-201ENST00000613014 469 ntBASIC3.5□□□□□ -1.85
LDB2O43679 AL603758.1-201ENST00000618654 241 ntBASIC3.5□□□□□ -1.85
LDB2O43679 MIR6130-201ENST00000619419 109 ntBASIC3.5□□□□□ -1.85
LDB2O43679 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB2O43679 AC099654.14-201ENST00000638599 341 ntBASIC3.5□□□□□ -1.85
LDB2O43679 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LDB2O43679 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB2O43679 MTCO1P12-201ENST00000414273 1543 ntBASIC3.49□□□□□ -1.85
LDB2O43679 RPS4XP5-202ENST00000449995 1334 ntBASIC3.49□□□□□ -1.85
LDB2O43679 EXOC5P1-201ENST00000510543 1969 ntBASIC3.49□□□□□ -1.85
LDB2O43679 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB2O43679 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LDB2O43679 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB2O43679 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB2O43679 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB2O43679 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LDB2O43679 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 Y_RNA.89-201ENST00000363031 102 ntBASIC3.49□□□□□ -1.85
LDB2O43679 SNORD56.2-201ENST00000363242 71 ntBASIC3.49□□□□□ -1.85
LDB2O43679 RNU5E-8P-201ENST00000363502 116 ntBASIC3.49□□□□□ -1.85
LDB2O43679 RNU6-534P-201ENST00000364877 106 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB2O43679 Y_RNA.390-201ENST00000383932 102 ntBASIC3.49□□□□□ -1.85
LDB2O43679 RNU6-483P-201ENST00000384088 108 ntBASIC3.49□□□□□ -1.85
LDB2O43679 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 AL109755.1-201ENST00000401791 649 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB2O43679 ATP5JP1-201ENST00000431631 322 ntBASIC3.49□□□□□ -1.85
LDB2O43679 RPL23AP30-201ENST00000432419 501 ntBASIC3.49□□□□□ -1.85
LDB2O43679 HMGB1P31-201ENST00000437242 427 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AL662791.1-201ENST00000441992 928 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB2O43679 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 RBMY2UP-201ENST00000453474 324 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC093278.1-201ENST00000494700 600 ntBASIC3.49□□□□□ -1.85
LDB2O43679 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 RNU6-1281P-201ENST00000516223 105 ntBASIC3.49□□□□□ -1.85
LDB2O43679 RNU2-58P-201ENST00000516403 183 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 DEFB108D-201ENST00000527787 222 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AP004242.1-201ENST00000533701 349 ntBASIC3.49□□□□□ -1.85
LDB2O43679 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB2O43679 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB2O43679 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.49□□□□□ -1.85
LDB2O43679 MIR3922-201ENST00000585192 84 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC098848.2-201ENST00000588023 330 ntBASIC3.49□□□□□ -1.85
LDB2O43679 GLUD1P4-201ENST00000590914 418 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC007687.1-201ENST00000602704 304 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms