Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 SNORD14B-201ENST00000364533 90 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 RNU6-326P-201ENST00000365480 107 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 SNORD63-201ENST00000384262 68 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 Y_RNA.504-201ENST00000384481 104 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXA2O43364 TMSB10P2-201ENST00000416049 131 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 U8.22-201ENST00000459141 133 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA2O43364 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXA2O43364 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXA2O43364 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.79□□□□□ -1.48
HOXA2O43364 AC011476.5-201ENST00000615594 130 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA2O43364 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA2O43364 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HOXA2O43364 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
HOXA2O43364 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 RNU5A-1-201ENST00000362698 116 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 Y_RNA.123-201ENST00000363338 102 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 SNORD56.6-201ENST00000384569 71 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 AL022722.2-201ENST00000402519 180 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA2O43364 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA2O43364 AC006466.1-201ENST00000438721 289 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 RPL23AP81-201ENST00000455252 467 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 RPS29P27-201ENST00000463711 170 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 AC009127.1-201ENST00000467090 155 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA2O43364 BX284632.1-201ENST00000478218 541 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 HSPE1P6-201ENST00000479457 291 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA2O43364 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 RNU2-31P-201ENST00000516954 155 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXA2O43364 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA2O43364 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 AL161798.1-201ENST00000604630 131 ntBASIC5.78□□□□□ -1.48
HOXA2O43364 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXA2O43364 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA2O43364 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXA2O43364 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA2O43364 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA2O43364 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXA2O43364 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HOXA2O43364 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA2O43364 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
HOXA2O43364 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA2O43364 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXA2O43364 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA2O43364 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA2O43364 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA2O43364 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA2O43364 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA2O43364 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA2O43364 RNU6-1301P-201ENST00000362724 104 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 RN7SKP103-201ENST00000363848 320 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 GLULP6-201ENST00000399502 913 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 Y_RNA.623-201ENST00000411128 95 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXA2O43364 PSMD10P3-201ENST00000437000 448 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXA2O43364 AC104164.2-201ENST00000496953 495 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 SNORD116-28-201ENST00000516123 91 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 RN7SKP147-201ENST00000517154 244 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 FTH1P11-201ENST00000517577 551 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 AC022968.1-201ENST00000567372 442 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA2O43364 MIR4436B2-201ENST00000581415 91 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 MIR4436B1-201ENST00000583272 91 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 SNORD84-203ENST00000584275 78 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 AC067852.4-201ENST00000590314 478 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA2O43364 AL078605.1-201ENST00000603529 500 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 MIR6798-201ENST00000612887 67 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 uc_338.7-201ENST00000621834 124 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXA2O43364 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA2O43364 AC093671.1-201ENST00000624981 2929 ntBASIC5.77□□□□□ -1.49
HOXA2O43364 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA2O43364 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA2O43364 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms