Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 RPL37P21-201ENST00000435890 276 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 EPS15P1-201ENST00000448836 336 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC093392.2-201ENST00000450682 337 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 ZNF114P1-201ENST00000453500 292 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 RPS26P21-201ENST00000475397 348 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC087373.1-201ENST00000524920 491 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC079600.2-201ENST00000550076 130 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 PCMTD1P2-201ENST00000565017 355 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 HMGB1P6-201ENST00000569046 646 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 ROCK1P1-201ENST00000573767 549 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AL035413.2-201ENST00000604801 525 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 OR2AS2P-201ENST00000606902 342 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC091965.5-201ENST00000624785 342 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 MTCO1P9-201ENST00000505577 1534 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 MTND5P19-201ENST00000424872 1794 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-501P-201ENST00000364072 100 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-637P-201ENST00000384050 107 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC078974.1-201ENST00000411597 223 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AL139281.1-201ENST00000422120 335 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 RPS27AP14-201ENST00000422868 454 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC244505.4-201ENST00000434905 287 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AL121871.1-201ENST00000443413 436 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 SSXP5-201ENST00000443473 287 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 KATNBL1P6-201ENST00000453433 915 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC234775.1-201ENST00000454247 670 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 MTCO1P42-201ENST00000457379 726 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 BET1P1-201ENST00000482276 359 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC109486.1-201ENST00000486833 374 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 RPF2P2-201ENST00000504693 896 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 SNORA70.16-201ENST00000516390 95 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 CLIC4P2-201ENST00000601934 717 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AL357094.1-201ENST00000603845 844 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC106900.2-201ENST00000604994 317 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC091965.4-201ENST00000607691 587 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AF246928.1-201ENST00000623768 87 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC093831.2-201ENST00000624393 3427 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 AC012321.1-201ENST00000561622 1588 ntBASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.91□□□□□ -1.94
NEDD8-MDP1E9PL57 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NEDD8-MDP1E9PL57 AL445523.1-201ENST00000451184 1362 ntBASIC2.9□□□□□ -1.94
NEDD8-MDP1E9PL57 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NEDD8-MDP1E9PL57 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 U8.14-201ENST00000390843 143 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 SETP8-201ENST00000435341 628 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 TRIM60P18-201ENST00000441518 828 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AP1S2P1-201ENST00000457344 379 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC135721.1-201ENST00000497954 479 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU1-61P-201ENST00000516107 151 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU6-1003P-201ENST00000517099 105 ntBASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.9□□□□□ -1.95
NEDD8-MDP1E9PL57 AC106038.2-201ENST00000520706 568 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms