Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CIR1P3-201ENST00000405137 479 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RNU2-9P-201ENST00000410194 145 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 BX842559.1-201ENST00000419615 532 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 SDCBPP3-201ENST00000419629 891 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AC008850.1-201ENST00000427546 362 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 MTATP6P16-201ENST00000434543 526 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 HMGB3P12-201ENST00000438745 556 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RPL21P23-201ENST00000446654 460 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AC092451.1-201ENST00000480211 153 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 GMPSP1-201ENST00000514075 579 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 Y_RNA.693-201ENST00000516641 110 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RNU6-840P-201ENST00000517275 65 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 OR5AQ1P-201ENST00000527596 927 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 BDH2P1-201ENST00000602288 736 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AP001330.5-201ENST00000607176 411 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 ZNF680P1-201ENST00000436625 1469 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 EXOC5P1-201ENST00000510543 1969 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 Y_RNA.9-201ENST00000362354 101 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 RNU5A-1-201ENST00000362698 116 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 RNU6-960P-201ENST00000364056 120 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 Y_RNA.381-201ENST00000365666 102 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 Y_RNA.450-201ENST00000384198 113 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 BTF3P7-201ENST00000407097 488 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC018630.2-202ENST00000422992 927 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 MTCYBP5-201ENST00000423752 1135 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 RAC1P6-201ENST00000423911 575 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 FGF7P6-202ENST00000451282 293 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC022364.2-201ENST00000457963 554 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC126389.1-201ENST00000477436 290 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 TRBV12-2-201ENST00000489763 344 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC026427.2-201ENST00000506228 536 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 FTH1P9-201ENST00000513251 355 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC010342.1-201ENST00000514047 877 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 RN7SKP13-201ENST00000515933 244 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 Y_RNA.704-201ENST00000516851 102 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AL512360.1-201ENST00000555346 234 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC007179.3-201ENST00000604976 235 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 FRG1KP-201ENST00000623592 341 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC005609.4-201ENST00000625071 447 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 U6.105-201ENST00000637379 88 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AP000553.6-201ENST00000641242 118 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 AC007823.1-201ENST00000569932 1566 ntBASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TBC1D3FA6NER0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.82
TBC1D3FA6NER0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.65□□□□□ -1.82
TBC1D3FA6NER0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AC073343.1-201ENST00000328239 651 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 RNA5SP50-201ENST00000363731 107 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 RNU6-1090P-201ENST00000364065 94 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 SMIM11P1-201ENST00000369586 178 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 RNU2-39P-201ENST00000410604 198 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 TXNP1-201ENST00000441872 371 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AC020550.1-201ENST00000447385 163 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 RN7SL432P-201ENST00000484057 298 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AC074250.1-201ENST00000511117 192 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 SNORD27.1-201ENST00000516319 72 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 RN7SKP289-201ENST00000517244 295 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 AP001646.1-201ENST00000527936 915 ntBASIC3.65□□□□□ -1.83
TBC1D3FA6NER0 OR4R1P-201ENST00000529879 463 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms