Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC004486.1-201ENST00000546846 233 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC008015.1-201ENST00000555505 465 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 ZNF192P1-203ENST00000565888 810 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC012435.1-202ENST00000568772 240 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AP000787.2-201ENST00000604432 568 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AL031176.1-201ENST00000604554 466 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC018638.7-201ENST00000605836 1114 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC072039.2-201ENST00000608883 439 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC004696.1-201ENST00000614345 607 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC002550.2-201ENST00000621246 394 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC012150.2-201ENST00000621300 544 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AL513185.3-201ENST00000433335 1300 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 AC009812.4-201ENST00000569134 1805 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 DDX43P2-201ENST00000604753 1354 ntBASIC2.1□□□□□ -2.07
TRAV40A0A0B4J280 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-462P-201ENST00000362659 105 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 Y_RNA.97-201ENST00000363094 102 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 Y_RNA.169-201ENST00000363745 96 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RNU1-39P-201ENST00000383897 165 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 MIR320C1-201ENST00000408566 88 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC099677.1-201ENST00000420575 175 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC024082.2-201ENST00000434771 238 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RPL26P6-201ENST00000440913 438 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RPL7P36-201ENST00000444633 681 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 GDI2P2-201ENST00000445131 608 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 MRPL50P4-201ENST00000446432 475 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AL133217.1-201ENST00000450980 425 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 CACYBPP2-201ENST00000453625 678 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AP000705.1-201ENST00000454567 350 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RN7SL429P-201ENST00000479090 223 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RN7SL489P-201ENST00000486185 223 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC006483.1-201ENST00000487308 313 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RN7SL327P-201ENST00000488659 223 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC010486.2-201ENST00000505572 483 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 MLLT10P2-201ENST00000506434 249 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC024589.1-201ENST00000512207 263 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 SNORA3.4-201ENST00000515969 96 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP320-201ENST00000516263 124 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 SNORA31.8-201ENST00000516327 108 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RPL7P20-201ENST00000520308 745 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC239860.2-201ENST00000525886 270 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC243972.3-201ENST00000539655 198 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC027176.1-201ENST00000560204 514 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC135628.1-201ENST00000568867 534 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC005951.2-201ENST00000576282 495 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC090615.1-201ENST00000577519 154 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AL353997.4-201ENST00000586196 166 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 BNIP3P23-201ENST00000599655 511 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AP001429.1-201ENST00000602568 530 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AP000811.1-201ENST00000603803 651 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AL360219.1-201ENST00000610230 366 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 VIS1.1-201ENST00000610517 203 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 RN7SL853P-201ENST00000617250 223 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC091304.6-201ENST00000619761 202 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 AC022079.1-201ENST00000621546 602 ntBASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV40A0A0B4J280 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.08
TRAV40A0A0B4J280 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
TRAV40A0A0B4J280 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 RNU5E-8P-201ENST00000363502 116 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 SNORA51.2-201ENST00000364595 132 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-769P-201ENST00000384407 104 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 TAS2R15P-201ENST00000390674 928 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC090774.1-201ENST00000435925 246 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 ZNF114P1-201ENST00000453500 292 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 SNORD121B-201ENST00000458838 81 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC072039.1-201ENST00000477611 581 ntBASIC2.08□□□□□ -2.08
TRAV40A0A0B4J280 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms