Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 TPTE2P4-201ENST00000258589 1605 ntBASIC1.11□□□□□ -2.23
TRAV1-2A0A0B4J238 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AL356292.1-201ENST00000283110 373 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-730P-201ENST00000383954 104 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 MIR767-201ENST00000390228 109 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-1197P-201ENST00000391183 107 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 RNA5SP450-201ENST00000411206 102 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 XKRYP1-201ENST00000423438 492 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 GTF2IP20-201ENST00000431663 360 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 XKRYP2-201ENST00000432915 492 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC092573.2-201ENST00000434546 243 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 C1DP3-201ENST00000455013 423 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 PMCHL2-203ENST00000457791 237 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU1-123P-201ENST00000458950 160 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC005410.1-202ENST00000460347 485 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC023141.11-201ENST00000508864 202 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU2-19P-201ENST00000517288 84 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC090821.2-201ENST00000523552 176 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 CBX3P2-202ENST00000583365 535 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 NRBF2P1-201ENST00000587407 859 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC005498.1-201ENST00000592125 465 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC025588.3-201ENST00000604182 274 ntBASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV1-2A0A0B4J238 AC080128.1-201ENST00000474389 1917 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AP005901.5-201ENST00000545779 1796 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AL033519.2-201ENST00000403958 392 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 RNU6-174P-201ENST00000410406 106 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC004865.1-201ENST00000442276 1003 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC118469.1-201ENST00000442943 488 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 FAM92A1P2-202ENST00000504766 877 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC068135.2-201ENST00000569293 1028 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AL645939.4-201ENST00000604495 135 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AL449363.1-201ENST00000617815 186 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC073968.1-201ENST00000618594 637 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AC091953.2-201ENST00000623979 160 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 AP003399.1-201ENST00000637534 361 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 MKKS-204ENST00000639674 192 ntBASIC1.09□□□□□ -2.23
TRAV1-2A0A0B4J238 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.09□□□□□ -2.24
TRAV1-2A0A0B4J238 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
TRAV1-2A0A0B4J238 AC004520.1-201ENST00000608362 1413 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 RNU4-23P-201ENST00000362839 140 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 RNA5SP190-201ENST00000365222 118 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 MIR150-201ENST00000385048 84 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 SNORA67.5-201ENST00000391036 107 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AL590084.1-201ENST00000407885 387 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 RNU4-74P-201ENST00000411280 161 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 OR51A5P-201ENST00000415429 942 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 RPL27AP8-201ENST00000424277 446 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 SDAD1P3-201ENST00000427380 333 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC236972.1-201ENST00000433225 199 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 DYNLL1P5-201ENST00000467158 270 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC022447.3-201ENST00000506865 495 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 RNU6-928P-201ENST00000516876 104 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 SNORA48.10-201ENST00000516965 160 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AP004247.1-201ENST00000531556 1289 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 MIR5571-201ENST00000577998 113 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AP000254.1-201ENST00000609934 520 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AC005296.1-201ENST00000616145 209 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 PISRT1-201ENST00000626175 531 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 SCARNA15.3-201ENST00000626315 122 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 SCARNA4.1-201ENST00000628597 123 ntBASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV1-2A0A0B4J238 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms