Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 RNY4P28-201ENST00000365281 93 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 RNU6-326P-201ENST00000365480 107 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 SNORA16A-201ENST00000384342 137 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 MIR105-2-201ENST00000385083 81 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AL022722.2-201ENST00000402519 180 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 LAP3P1-201ENST00000403648 294 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 SPTLC1P2-201ENST00000407089 121 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 Y_RNA.623-201ENST00000411128 95 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AL592148.1-201ENST00000413568 445 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AL627311.1-201ENST00000431514 115 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 CYCSP6-201ENST00000434498 302 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AL450023.1-201ENST00000450868 751 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 RPS23P2-201ENST00000463671 415 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC074255.1-201ENST00000511259 501 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 BX510359.5-201ENST00000515651 304 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 RNU6-377P-201ENST00000515965 102 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 RN7SKP272-201ENST00000516988 232 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 IGLV2-28-201ENST00000520681 304 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC084851.1-201ENST00000529105 249 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC067852.4-201ENST00000590314 478 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 IMMP1LP3-201ENST00000604197 224 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 AC025574.2-201ENST00000615621 514 ntBASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 C4BPAP1-201ENST00000415474 1893 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 Y_RNA.292-201ENST00000364904 97 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 RNU6-1035P-201ENST00000384477 107 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC005042.1-201ENST00000393397 800 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 Y_RNA.590-201ENST00000410140 107 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AL133173.1-201ENST00000423458 397 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC124916.1-201ENST00000444020 547 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 COPS8P2-201ENST00000473228 627 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 RN7SL583P-201ENST00000475692 287 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 RN7SL727P-201ENST00000482164 296 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 RNU2-31P-201ENST00000516954 155 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC025755.1-201ENST00000521306 278 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC137627.1-201ENST00000545761 289 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AL121603.1-201ENST00000553815 142 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 NDUFB4P11-201ENST00000560510 395 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 MRPS21P7-201ENST00000566937 238 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AL161798.1-201ENST00000604630 131 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 SNORD113-5-201ENST00000607261 78 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC211433.2-201ENST00000608433 387 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 AC018445.2-201ENST00000622987 260 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 U6.106-201ENST00000636360 105 ntBASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HRH3Q9Y5N1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms