Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC012442.3-202ENST00000636742 206 ntBASIC3.51□□□□□ -1.85
CLDN16Q9Y5I7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN16Q9Y5I7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN16Q9Y5I7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.51□□□□□ -1.85
CLDN16Q9Y5I7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CLDN16Q9Y5I7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN16Q9Y5I7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AC073343.1-201ENST00000328239 651 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RNU4-12P-201ENST00000365233 139 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RNU5E-6P-201ENST00000365574 115 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-701P-201ENST00000384059 107 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 SNORA36C-201ENST00000384289 132 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 Y_RNA.554-201ENST00000384672 102 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 MIR558-201ENST00000384920 94 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 CALM2P3-201ENST00000400429 449 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RNU2-9P-201ENST00000410194 145 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RN7SKP202-201ENST00000410439 330 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 SYF2P2-201ENST00000417620 583 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 MTATP6P18-201ENST00000417994 673 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 EIF1P1-201ENST00000421436 341 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 MTCO3P30-201ENST00000426425 670 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AC093106.2-201ENST00000428212 385 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 TIMM9P3-201ENST00000428659 274 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RPS20P5-201ENST00000434808 360 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RN7SL432P-201ENST00000484057 298 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 ARL2BPP6-201ENST00000512757 439 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL117351.2-201ENST00000513571 157 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-718P-201ENST00000516166 105 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-1092P-201ENST00000516955 87 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL020997.2-201ENST00000602607 184 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL606834.2-201ENST00000602954 668 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL670379.6-201ENST00000603753 252 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL391646.1-201ENST00000603860 190 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL670379.11-201ENST00000604059 253 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AC008162.1-201ENST00000604718 254 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL670379.1-201ENST00000604752 252 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL670379.5-201ENST00000605253 252 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL670379.12-201ENST00000605291 253 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL670379.8-201ENST00000605353 252 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL670379.7-201ENST00000605823 252 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AP002360.4-201ENST00000606980 481 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 AC068831.7-201ENST00000616954 363 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN16Q9Y5I7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 MIR423-201ENST00000362201 94 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-188P-201ENST00000364207 107 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 MIR1-2-201ENST00000384961 85 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 RNU2-39P-201ENST00000410604 198 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 SNORA57.3-201ENST00000411095 141 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 MTCO2P19-201ENST00000427513 598 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 MED13P1-201ENST00000428342 171 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC007389.2-201ENST00000434630 306 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 BNIP3P2-201ENST00000441221 577 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC023598.1-201ENST00000472521 361 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC117522.1-201ENST00000509821 380 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AF213884.2-201ENST00000510417 903 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC010342.1-201ENST00000514047 877 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC055876.1-202ENST00000567053 138 ntBASIC3.49□□□□□ -1.85
CLDN16Q9Y5I7 AC005951.2-201ENST00000576282 495 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms