Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RNY1P4-201ENST00000384595 115 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 MIR222-201ENST00000384992 110 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 SSR1P1-201ENST00000407630 814 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 BZW1P2-201ENST00000473537 826 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 FO393415.2-201ENST00000480085 343 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC009901.1-201ENST00000506703 541 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 RNU2-44P-201ENST00000516795 194 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC109446.2-201ENST00000567872 497 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 SNRPGP15-201ENST00000600149 222 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC097504.2-201ENST00000608088 454 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AL031601.2-202ENST00000622650 282 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 RNU6-203P-201ENST00000384038 104 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 RNU6-1105P-201ENST00000384774 107 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 RNU6-1077P-201ENST00000410506 102 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC241520.1-201ENST00000422654 1099 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 SNRPEP4-201ENST00000435815 279 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC090897.2-201ENST00000581715 130 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 CBX3P2-202ENST00000583365 535 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 SNORD84-203ENST00000584275 78 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC106028.5-201ENST00000610332 395 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC068831.7-201ENST00000616954 363 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC012640.5-201ENST00000623897 319 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 AC130650.2-201ENST00000618736 2403 ntBASIC1.94□□□□□ -2.1
SHANK2Q9UPX8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 Y_RNA.458-201ENST00000384240 102 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 AC234781.2-201ENST00000426370 994 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 RPL21P66-201ENST00000426566 466 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 UBE2FP3-201ENST00000436366 524 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 MTCO1P48-201ENST00000448024 1096 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 RFC5P1-201ENST00000454419 874 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 RPL30P11-201ENST00000495304 339 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 SNORA31.23-201ENST00000517219 133 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 AP003033.1-201ENST00000527244 415 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 uc_338.9-201ENST00000617424 182 ntBASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.93□□□□□ -2.1
SHANK2Q9UPX8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
SHANK2Q9UPX8 SNORA14A-201ENST00000364773 135 ntBASIC1.92□□□□□ -2.1
SHANK2Q9UPX8 AL138880.1-201ENST00000405824 642 ntBASIC1.92□□□□□ -2.1
SHANK2Q9UPX8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.92□□□□□ -2.1
SHANK2Q9UPX8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.92□□□□□ -2.1
SHANK2Q9UPX8 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.92□□□□□ -2.1
SHANK2Q9UPX8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.92□□□□□ -2.1
SHANK2Q9UPX8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 AC073055.1-201ENST00000456901 1621 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 HMGB1P5-201ENST00000255320 642 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 CD24P4-201ENST00000382840 243 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 ELOCP11-201ENST00000436690 332 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 ELOCP16-201ENST00000444494 332 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 AC019176.1-201ENST00000518519 225 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 VN1R81P-201ENST00000602085 372 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 AC007275.1-201ENST00000621243 671 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SHANK2Q9UPX8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 RNU6-799P-201ENST00000363567 107 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 AC004022.2-201ENST00000413824 193 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 RPL37P6-202ENST00000464216 403 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 SUMO2P6-201ENST00000505273 288 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 RNA5SP468-201ENST00000516782 93 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 MTCO1P40-201ENST00000574371 625 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 AC243773.3-201ENST00000613270 256 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 MIR4496-201ENST00000635896 61 ntBASIC1.9□□□□□ -2.11
SHANK2Q9UPX8 RNA5SP457-201ENST00000363657 124 ntBASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 RNA5SP38-201ENST00000410750 119 ntBASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 ATG12P2-201ENST00000456830 416 ntBASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms