Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 BX295541.1-201ENST00000417774 250 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 COTL1P1-201ENST00000422309 375 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC009961.2-201ENST00000435771 251 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AL451074.3-201ENST00000437709 472 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 RPS24P6-201ENST00000452670 400 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AP003467.2-201ENST00000520175 319 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 CBX3P7-201ENST00000532876 502 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC126177.3-201ENST00000551839 688 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AL391840.1-201ENST00000571144 367 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC060771.1-201ENST00000582031 164 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC068790.3-201ENST00000602988 553 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC012669.1-201ENST00000603209 283 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 RNU6-87P-201ENST00000607561 108 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC017083.3-201ENST00000609955 700 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 ATP5A1P2-202ENST00000616464 443 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 DUXAP9-208ENST00000622815 614 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC091905.1-201ENST00000624400 311 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 AC110994.2-201ENST00000635481 492 ntBASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.13□□□□□ -1.75
SCAF8Q9UPN6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 FARSBP1-201ENST00000435808 1778 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 RNY4P14-201ENST00000363656 96 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 RNY4P34-201ENST00000364779 95 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 RNA5SP167-201ENST00000365461 116 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 FGF7P8-201ENST00000402994 292 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 RNU2-8P-201ENST00000410727 190 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 RNA5SP306-201ENST00000411087 107 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AL358934.1-201ENST00000432346 324 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 MTCO3P18-201ENST00000440206 761 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 SNRPEP8-201ENST00000442866 260 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC234775.1-201ENST00000454247 670 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC099563.1-201ENST00000456086 418 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 S100A11P2-201ENST00000467589 312 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC019235.1-201ENST00000503847 207 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC117522.1-201ENST00000509821 380 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC005921.1-201ENST00000510589 286 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 MIR4276-201ENST00000584832 70 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC006338.1-201ENST00000618453 749 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC104985.2-201ENST00000620598 500 ntBASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCAF8Q9UPN6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC006504.1-201ENST00000562493 3666 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RNU6-797P-201ENST00000363101 109 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 U8.3-201ENST00000363321 132 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 SNORA72.1-201ENST00000363485 129 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RNA5SP189-201ENST00000364920 115 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 U3.19-201ENST00000390893 196 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RNU6-780P-201ENST00000391030 104 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RNU6-754P-201ENST00000391166 107 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms