Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 NUP58P1-201ENST00000502546 1738 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 SNRPEP3-201ENST00000338402 276 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RNU4-66P-201ENST00000365199 138 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.489-201ENST00000384410 101 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RPS20P2-201ENST00000402520 389 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 NPM1P38-201ENST00000403835 865 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC127391.1-201ENST00000411737 98 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 HSPE1P22-201ENST00000456856 327 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.653-201ENST00000459091 95 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AP003467.2-201ENST00000520175 319 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AP002404.1-201ENST00000532005 451 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 EIF4BP1-201ENST00000554881 351 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 MIR98-201ENST00000606724 119 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AL390240.1-201ENST00000612950 384 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AL133173.2-201ENST00000614270 90 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC116096.1-201ENST00000566804 2314 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RNU1-15P-201ENST00000353977 144 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 SNORA38.1-201ENST00000364172 131 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RNU1-39P-201ENST00000383897 165 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RPL7P60-201ENST00000397636 735 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AL391219.1-201ENST00000422570 483 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC023347.2-201ENST00000433994 462 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 MRPS31P2-201ENST00000451581 518 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC010655.3-201ENST00000478818 450 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RPL21P6-201ENST00000479171 504 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RPL7P23-201ENST00000493874 747 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC098591.2-201ENST00000510152 315 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 RNU6-1143P-201ENST00000516125 104 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC009812.2-201ENST00000517657 457 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC027309.2-201ENST00000520566 192 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 MIR3922-201ENST00000585192 84 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AL033523.1-201ENST00000605153 153 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC005344.1-201ENST00000613391 459 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 OSBPL9P1-201ENST00000604744 1469 ntBASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.87□□□□□ -1.95
NOTCH3Q9UM47 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 Z95327.2-201ENST00000414579 1873 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC006020.1-201ENST00000420179 1854 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.100-201ENST00000363141 102 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RN7SKP44-201ENST00000363602 316 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.307-201ENST00000365022 117 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 BTBD10P2-201ENST00000404779 676 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 MTCO3P45-201ENST00000443036 613 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RPS17P13-201ENST00000448974 407 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 CACYBPP2-201ENST00000453625 678 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC093303.1-201ENST00000514549 295 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AP003072.2-201ENST00000527756 676 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC136601.2-201ENST00000604356 474 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 MIR6715A-201ENST00000615929 79 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC125336.1-201ENST00000508893 2827 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 OR1S2-201ENST00000302592 978 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms