Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AL049641.1-201ENST00000441055 1948 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.404-201ENST00000383978 102 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 SNORD3H-201ENST00000384486 214 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 MIR568-201ENST00000385036 95 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 LAP3P1-201ENST00000403648 294 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 RN7SKP16-201ENST00000410180 299 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 E2F6P2-201ENST00000420708 748 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC093414.1-201ENST00000434712 514 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC005154.2-201ENST00000438110 379 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC016831.4-201ENST00000438302 307 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 TDGF1P1-201ENST00000445734 527 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 ARL2BPP10-201ENST00000446487 531 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 PRDX3P3-201ENST00000447765 522 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 SNORD5.1-201ENST00000458800 75 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 RPL21P41-201ENST00000459863 264 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC091180.1-201ENST00000462104 372 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 RNA5SP108-201ENST00000605921 117 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 MIR15A-201ENST00000607334 83 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AC009229.3-201ENST00000608056 282 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 MIR8069-1-201ENST00000616627 86 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 MIR8069-2-201ENST00000621412 86 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 AL592182.3-201ENST00000642132 3304 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 SNORD62.1-201ENST00000362541 86 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-196P-201ENST00000384315 107 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.480-201ENST00000384364 102 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.534-201ENST00000384599 112 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 MIR589-201ENST00000385238 99 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 MRPL42P3-201ENST00000401492 326 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 RPS4XP7-201ENST00000406274 780 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.594-201ENST00000410373 140 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 RN7SKP106-201ENST00000410832 272 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC114755.2-201ENST00000413520 361 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC073063.1-201ENST00000434352 607 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AL162591.2-201ENST00000449634 317 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 SNORA25.10-201ENST00000515926 124 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 RN7SKP21-201ENST00000516503 220 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 RNU1-54P-201ENST00000517181 120 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC026371.1-201ENST00000551867 419 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC005951.2-201ENST00000576282 495 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 PISRT1.1-201ENST00000616930 107 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 MIR6853-201ENST00000619642 74 ntBASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDC42EP3Q9UKI2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 PNPT1P2-201ENST00000456768 2050 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC006971.1-201ENST00000407916 4486 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 RNA5SP52-201ENST00000362448 134 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-288P-201ENST00000363690 104 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms