Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC073073.2-201ENST00000609827 2578 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 DEFB108F-201ENST00000344638 222 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 FRG1CP-201ENST00000358464 769 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 RNU1-33P-201ENST00000364249 162 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 SNORA9-201ENST00000384215 133 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 RNA5SP239-201ENST00000410218 129 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 RPS20P5-201ENST00000434808 360 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 SNRPGP6-201ENST00000451124 220 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 AC010631.1-201ENST00000474150 156 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 GMPSP1-201ENST00000514075 579 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 RNU6-390P-201ENST00000516259 103 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 HMGB1P6-201ENST00000569046 646 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 RPL23AP84-201ENST00000571193 464 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 AP002360.4-201ENST00000606980 481 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AL355810.1-201ENST00000614629 552 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AC110801.1-201ENST00000623590 212 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
COL20A1Q9P218 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL20A1Q9P218 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
COL20A1Q9P218 SDAD1P2-201ENST00000441308 2028 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL20A1Q9P218 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 Y_RNA.159-201ENST00000363674 87 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNA5SP50-201ENST00000363731 107 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNA5SP42-201ENST00000364278 115 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNU6-1322P-201ENST00000364309 107 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNA5SP72-201ENST00000364442 117 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNA5SP267-201ENST00000364893 126 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNU5E-6P-201ENST00000365574 115 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNU1-39P-201ENST00000383897 165 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AL359634.1-202ENST00000404721 284 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 BX842559.1-201ENST00000419615 532 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL20A1Q9P218 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 FGF7P6-202ENST00000451282 293 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC027673.1-201ENST00000456245 405 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC084357.1-201ENST00000473404 255 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 RN7SL432P-201ENST00000484057 298 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC108860.1-201ENST00000484521 383 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 ARL4AP2-201ENST00000507378 601 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC026784.1-201ENST00000507986 352 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC105914.1-201ENST00000511798 226 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 RNU6-718P-201ENST00000516166 105 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 Y_RNA.693-201ENST00000516641 110 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 SNORA31.22-201ENST00000517204 135 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 IGKV2D-23-201ENST00000518179 286 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 HMGB1P41-201ENST00000520234 440 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC008489.1-201ENST00000524271 483 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 OR5AQ1P-201ENST00000527596 927 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 ARL2BPP2-201ENST00000550907 489 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AL157687.1-201ENST00000554853 619 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AL512360.1-201ENST00000555346 234 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 KLKP1-201ENST00000595979 403 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AP001330.5-201ENST00000607176 411 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 AL355365.1-201ENST00000616480 294 ntBASIC4.02□□□□□ -1.77
COL20A1Q9P218 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL20A1Q9P218 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL20A1Q9P218 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
COL20A1Q9P218 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL20A1Q9P218 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL20A1Q9P218 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL20A1Q9P218 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL20A1Q9P218 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL20A1Q9P218 RNU6-960P-201ENST00000364056 120 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 Y_RNA.402-201ENST00000383972 102 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 Y_RNA.450-201ENST00000384198 113 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RNU6-39P-201ENST00000384344 107 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 Y_RNA.573-201ENST00000384763 105 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 HMGN2P8-201ENST00000391458 268 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RPS4XP8-201ENST00000402039 771 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AL603766.1-201ENST00000407763 664 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RNU2-36P-201ENST00000410361 191 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RNU2-39P-201ENST00000410604 198 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RAC1P6-201ENST00000423911 575 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms