Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 Y_RNA.409-201ENST00000383990 98 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-637P-201ENST00000384050 107 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 RPL23AP32-201ENST00000395315 459 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AL590002.1-201ENST00000406554 418 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR1277-201ENST00000408536 78 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC019097.1-201ENST00000424783 735 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC002075.2-201ENST00000425207 252 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 VDAC1P3-201ENST00000434069 851 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AL671855.1-201ENST00000446875 1203 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC023598.1-201ENST00000472521 361 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 RPL23AP41-201ENST00000484754 458 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 RPL32P34-201ENST00000486380 400 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC069439.1-201ENST00000494739 167 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AL133271.1-201ENST00000538229 291 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AL121579.1-201ENST00000555129 305 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC006504.3-201ENST00000586818 523 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC245014.2-201ENST00000603689 287 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AP001330.4-201ENST00000604350 154 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC246785.4-201ENST00000605374 287 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 SNORA62.6-201ENST00000606322 83 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AL360181.4-201ENST00000621752 134 ntBASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NCKIPSDQ9NZQ3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AL049781.1-201ENST00000623195 3585 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 MTND5P1-201ENST00000445440 1375 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 Y_RNA.1-201ENST00000352915 104 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-432P-201ENST00000384196 109 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR184-201ENST00000384962 84 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 RNA5SP424-201ENST00000390988 115 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC093578.1-201ENST00000415219 368 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 HMGB3P20-201ENST00000417997 600 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AL353193.1-201ENST00000421444 268 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 DUTP6-201ENST00000425573 462 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC006989.1-201ENST00000427212 131 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC133104.1-201ENST00000429100 218 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 HMGB1P31-201ENST00000437242 427 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 TPT1P14-201ENST00000448018 505 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 NFU1P2-201ENST00000448700 469 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 ELOCP23-201ENST00000452014 332 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 RPL23AP31-201ENST00000456160 467 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC055855.1-201ENST00000489563 579 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 VN1R104P-201ENST00000505115 1009 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC074344.1-201ENST00000512823 224 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 OR5AQ1P-201ENST00000527596 927 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 SNRPGP16-201ENST00000533275 226 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR5047-201ENST00000579212 100 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC104458.1-201ENST00000608243 463 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR7851-201ENST00000610611 160 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 RNVU1-4-201ENST00000612985 164 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC092794.2-201ENST00000620933 563 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 AC099654.14-201ENST00000638599 341 ntBASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.68□□□□□ -1.82
NCKIPSDQ9NZQ3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms