Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 DUXAP5-201ENST00000529668 529 ntBASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 AC092354.1-201ENST00000606057 376 ntBASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 AC012360.2-201ENST00000609349 391 ntBASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 uc_338.12-201ENST00000616344 181 ntBASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 AP003485.2-201ENST00000623636 610 ntBASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 AC008669.1-201ENST00000565823 2178 ntBASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 AC092435.3-201ENST00000565538 3654 ntBASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BLOC1S4Q9NUP1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 RNU1-105P-201ENST00000363470 161 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 RNU6-270P-201ENST00000364131 105 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 SNORA7.4-201ENST00000384249 137 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 RPL7P34-201ENST00000433316 712 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 RNU7-23P-201ENST00000459465 62 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AL358832.1-201ENST00000497800 389 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AC138853.1-201ENST00000503549 823 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 PHBP14-201ENST00000512887 367 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AC022616.6-201ENST00000520479 119 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 MTCO3P24-201ENST00000572729 782 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 MIR5680-201ENST00000577577 84 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 MIR4293-201ENST00000584305 78 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AP001981.2-201ENST00000603241 418 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 MIR92B-201ENST00000607575 96 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AC138932.5-201ENST00000617759 563 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 AC099654.7-201ENST00000635788 2127 ntBASIC3.52□□□□□ -1.85
BLOC1S4Q9NUP1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 RNA5SP383-201ENST00000362934 120 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 RNA5SP72-201ENST00000364442 117 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 RNU6-140P-201ENST00000384566 108 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC099548.1-201ENST00000421443 426 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 HMGB1P27-201ENST00000431429 603 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 SNORD97-201ENST00000459187 142 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 RN7SL863P-201ENST00000462370 296 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 RPL23AP14-201ENST00000468281 468 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC109925.1-201ENST00000478069 331 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AP000797.1-201ENST00000478870 387 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC011979.2-201ENST00000527568 352 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC107294.3-201ENST00000609211 526 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AC018692.3-201ENST00000623929 123 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 AL136313.1-201ENST00000624804 202 ntBASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
BLOC1S4Q9NUP1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AP003122.5-201ENST00000527668 3766 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 U3.6-201ENST00000363622 211 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 U3.11-201ENST00000364476 212 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 RNU6-805P-201ENST00000365643 106 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 MIR34B-201ENST00000385076 84 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 RNU4-47P-201ENST00000410876 114 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 USP9YP13-201ENST00000417797 480 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 ZNF90P2-204ENST00000419323 1075 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 DPPA2P1-201ENST00000428060 556 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL590365.1-201ENST00000450788 243 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 MTCO2P6-201ENST00000463134 685 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms