Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MTND1P34-201ENST00000438556 671 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AL121871.1-201ENST00000443413 436 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC012181.1-201ENST00000479895 423 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC093278.1-201ENST00000494700 600 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 RNU6-1095P-201ENST00000516148 108 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 RNU6-405P-201ENST00000516637 110 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 RNU6-528P-201ENST00000516926 100 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC103783.1-201ENST00000520506 373 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC018630.1-201ENST00000541376 925 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AL163153.1-201ENST00000554223 283 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC060771.1-201ENST00000582031 164 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 SNORD84-203ENST00000584275 78 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 NDUFA8P1-201ENST00000605525 367 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC008250.2-201ENST00000615261 205 ntBASIC3.66□□□□□ -1.82
DDX4Q9NQI0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX4Q9NQI0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
DDX4Q9NQI0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.65□□□□□ -1.82
DDX4Q9NQI0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.65□□□□□ -1.82
DDX4Q9NQI0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
DDX4Q9NQI0 MIR22-201ENST00000362190 85 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 DEFB109C-201ENST00000382575 264 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 DEFB109B-201ENST00000382656 264 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 FCF1P10-201ENST00000407590 479 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RNU2-47P-201ENST00000410649 186 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RNU6-55P-201ENST00000411092 107 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RNU6-954P-201ENST00000411355 107 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RPS3AP3-201ENST00000411933 242 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 MTND1P21-201ENST00000412991 285 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 ZNF885P-201ENST00000420174 1098 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 BEND7P1-201ENST00000422058 457 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RPS24P1-201ENST00000438550 371 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RN7SL330P-201ENST00000469709 307 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC010285.1-201ENST00000470580 392 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RPS27AP1-201ENST00000475545 471 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC004062.1-201ENST00000509926 645 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 CDC42P4-201ENST00000510507 563 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC017037.2-201ENST00000513850 890 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 MTCYBP20-201ENST00000524239 1129 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 RPL21P5-201ENST00000554662 472 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC009977.1-201ENST00000586015 570 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 UBE2L4-201ENST00000587688 464 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC146944.4-201ENST00000602697 718 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC078795.2-201ENST00000602835 1252 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AL136363.2-201ENST00000604173 851 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC103710.1-201ENST00000610003 901 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 MIR7106-201ENST00000612419 65 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC015540.1-201ENST00000615828 501 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC009159.1-201ENST00000618386 642 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC009268.2-201ENST00000621925 457 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AL158801.5-201ENST00000623123 465 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AL359740.1-201ENST00000624340 592 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC010149.2-201ENST00000637608 315 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 AC099654.13-201ENST00000639774 207 ntBASIC3.65□□□□□ -1.83
DDX4Q9NQI0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX4Q9NQI0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 RNU6-1078P-201ENST00000364522 103 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 RNU6-348P-201ENST00000384386 107 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 RNU6-248P-201ENST00000410720 107 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 MTCO3P12-201ENST00000416718 547 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC233728.2-201ENST00000425348 757 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 PGBD4P3-201ENST00000440731 581 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC117440.1-201ENST00000474107 571 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 RN7SKP298-201ENST00000515950 94 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC022616.6-201ENST00000520479 119 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AP000907.2-201ENST00000530827 353 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 H3F3AP1-201ENST00000559984 334 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AP001029.3-201ENST00000588063 596 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 AC068790.3-201ENST00000602988 553 ntBASIC3.64□□□□□ -1.83
DDX4Q9NQI0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms