Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL589880.1-201ENST00000448271 287 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AC025768.1-201ENST00000510057 267 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 RNA5SP182-201ENST00000516064 82 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 SUB1P3-201ENST00000564581 315 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AC024614.2-201ENST00000577584 372 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AP002826.1-201ENST00000608835 315 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AC010678.1-201ENST00000614118 713 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AC009032.1-201ENST00000617574 431 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AP003400.6-201ENST00000624698 740 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 AL022578.1-201ENST00000439330 1433 ntBASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KIAA1549Q9HCM3 TPTE2P4-201ENST00000258589 1605 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC130650.2-201ENST00000618736 2403 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 U3.40-201ENST00000408706 208 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AL358075.3-201ENST00000426289 226 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC234775.1-201ENST00000454247 670 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC104164.3-201ENST00000467363 1258 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC079203.1-201ENST00000487972 404 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 snoZ278.1-201ENST00000517059 112 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 MIR3683-201ENST00000580847 82 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC012254.4-201ENST00000588843 273 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC023043.2-201ENST00000589678 1026 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC079597.1-201ENST00000624306 508 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC103710.2-202ENST00000641454 2853 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 RNU6-374P-201ENST00000364146 108 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 MTND4LP10-201ENST00000435146 291 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 ARPC3P1-201ENST00000437218 533 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 RPL23AP16-201ENST00000441715 421 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 RNU6-420P-201ENST00000458780 107 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC104564.1-201ENST00000493028 407 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC008427.1-201ENST00000503102 655 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 RNU5F-8P-201ENST00000515941 111 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC008676.3-201ENST00000521237 435 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 CR383656.7-201ENST00000548164 174 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC090616.3-201ENST00000582184 217 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 UCA1.1-201ENST00000620952 75 ntBASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.54□□□□□ -2.16
KIAA1549Q9HCM3 Z82195.2-201ENST00000612348 18351 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 RNU6-1339P-201ENST00000363574 91 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 U8.10-201ENST00000384260 133 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 SNORD51-201ENST00000384320 80 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AC018630.2-202ENST00000422992 927 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 ZNF965P-201ENST00000432501 817 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AL445687.1-201ENST00000439946 251 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 TPT1P14-201ENST00000448018 505 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 DPPA3P1-201ENST00000448050 469 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AC025181.1-201ENST00000477507 416 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 OR4R1P-201ENST00000529879 463 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 OR4P1P-201ENST00000530808 1136 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 CYCSP26-201ENST00000534107 320 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 TRAV11-201ENST00000539512 339 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 VN1R80P-201ENST00000597126 338 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AP006248.3-201ENST00000623580 594 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 AC092608.3-201ENST00000625017 386 ntBASIC1.53□□□□□ -2.16
KIAA1549Q9HCM3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 ENSAP3-201ENST00000312710 333 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 MT-TC-201ENST00000387405 66 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 UBE2V1P11-201ENST00000411559 285 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 RPL23AP36-201ENST00000413895 458 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC092047.1-201ENST00000424997 240 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms