Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.44□□□□□ -1.86
BRF2Q9HAW0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 RNU6-701P-201ENST00000384059 107 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AL136116.1-201ENST00000403591 381 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 RPL17P36-201ENST00000420302 549 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 PIGFP2-201ENST00000421400 651 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC091390.3-201ENST00000426478 338 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 USP9YP14-201ENST00000430663 563 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AL358934.1-201ENST00000432346 324 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 FCF1P1-201ENST00000432690 571 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 RPS24P1-201ENST00000438550 371 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 RPS3AP46-201ENST00000448352 682 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 TPT1P7-201ENST00000458300 517 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AL160314.1-201ENST00000490836 438 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AL358832.1-201ENST00000497800 389 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC138853.1-201ENST00000503549 823 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC010493.1-201ENST00000513479 292 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 SNORD59.2-201ENST00000516873 68 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 MTCO2P4-201ENST00000517968 247 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 HMGB1P41-201ENST00000520234 440 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC007991.1-201ENST00000522680 631 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC022616.3-201ENST00000523940 148 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 MIR3186-201ENST00000577404 85 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 NDUFA8P1-201ENST00000605525 367 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 Z99129.1-201ENST00000612510 255 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC068880.5-201ENST00000624331 290 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC092447.7-201ENST00000422212 1621 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 AC058791.1-201ENST00000608412 3198 ntBASIC3.43□□□□□ -1.86
BRF2Q9HAW0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRF2Q9HAW0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 Y_RNA.296-201ENST00000364930 108 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 Y_RNA.517-201ENST00000384551 106 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 MIR325-201ENST00000385260 98 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 BTF3L4P3-201ENST00000418879 476 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC007919.1-201ENST00000429380 217 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 MTCO3P5-201ENST00000433620 714 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 MTATP6P30-201ENST00000443540 664 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC092798.1-201ENST00000458542 409 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC103987.1-201ENST00000473394 348 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 PCBP2P3-201ENST00000509726 843 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 DPPA3P3-201ENST00000603842 430 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 MTND1P37-201ENST00000636562 264 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AL392088.2-201ENST00000637607 285 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
BRF2Q9HAW0 AC233263.6-201ENST00000631132 1963 ntBASIC3.42□□□□□ -1.86
BRF2Q9HAW0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms