Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MRPS35P2-201ENST00000508242 191 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 RNU2-69P-201ENST00000516061 100 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-390P-201ENST00000516259 103 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 SCARNA16.2-201ENST00000516520 172 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AP006289.1-201ENST00000538089 277 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL110118.1-201ENST00000553543 400 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC140113.4-201ENST00000622087 222 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AL158163.1-201ENST00000603915 1649 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AL391684.1-202ENST00000641293 1636 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 MFSD8-216ENST00000641147 4009 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC087190.4-201ENST00000574616 8334 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-490P-201ENST00000362985 107 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-99P-201ENST00000364721 107 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 SNORA71.2-201ENST00000364941 134 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-398P-201ENST00000384143 109 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RNU4-65P-201ENST00000410473 140 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC140479.3-201ENST00000418944 1126 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AL391219.1-201ENST00000422570 483 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC093151.1-201ENST00000427711 313 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RPL23AP50-201ENST00000434149 455 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RPS23P1-201ENST00000491662 432 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RNA5SP228-201ENST00000516232 133 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.689-201ENST00000516589 107 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RNA5SP384-201ENST00000516615 116 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC009812.2-201ENST00000517657 457 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC023442.1-201ENST00000531247 422 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC015912.2-201ENST00000571053 181 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC010329.2-201ENST00000595195 2737 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 AC005592.1-201ENST00000566527 1640 ntBASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A2Q9H9S3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC091812.1-201ENST00000432235 1948 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.2-201ENST00000362330 96 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RNU1-108P-201ENST00000362556 161 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-1059P-201ENST00000363752 98 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 SNORA56-201ENST00000383966 129 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-128P-201ENST00000383976 107 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.428-201ENST00000384078 102 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-434P-201ENST00000384376 107 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-95P-201ENST00000384697 107 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC092809.3-201ENST00000415453 231 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RPS23P10-201ENST00000416185 486 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AL590139.1-201ENST00000416267 400 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RPL7P10-201ENST00000417407 739 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 USP9YP30-201ENST00000430729 455 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC010469.1-201ENST00000463864 576 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms