Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 RPL7P54-201ENST00000438336 674 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 RPL23AP20-201ENST00000447965 421 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AP000926.1-201ENST00000479573 241 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 HSPD1P15-201ENST00000505573 1122 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC026784.1-201ENST00000507986 352 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC010486.1-201ENST00000511793 424 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC010493.1-201ENST00000513479 292 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 SNORA70.18-201ENST00000516696 98 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL442663.2-201ENST00000554385 511 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL161713.1-201ENST00000555538 145 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC037471.2-201ENST00000564941 598 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 MIR3682-201ENST00000581338 84 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 NRBF2P1-201ENST00000587407 859 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 TPMTP1-201ENST00000592307 737 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL162413.1-201ENST00000603198 110 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AC007621.1-201ENST00000604544 437 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL365204.3-201ENST00000612448 685 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL160413.1-201ENST00000622780 310 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 CYP3A51P-201ENST00000633513 256 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AP000553.6-201ENST00000641242 118 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 AL365440.1-201ENST00000436135 2167 ntBASIC3.77□□□□□ -1.81
EBF3Q9H4W6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EBF3Q9H4W6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 RNU6-343P-201ENST00000364709 104 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AL391417.1-201ENST00000404100 426 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 RN7SKP177-201ENST00000410567 355 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 BX842559.1-201ENST00000419615 532 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 MTND2P23-201ENST00000422990 651 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC097713.2-201ENST00000430199 356 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 NDUFA5P4-201ENST00000436704 385 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC002381.1-201ENST00000447049 280 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC006480.1-201ENST00000449887 378 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC099563.1-201ENST00000456086 418 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 RPS4XP10-201ENST00000465034 731 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 RPL36AP51-201ENST00000487216 318 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 RNU6-835P-201ENST00000516974 104 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 RANP9-201ENST00000519957 271 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC103843.2-201ENST00000530523 682 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC034268.2-201ENST00000571784 482 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 MIR5195-201ENST00000583555 115 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AL353997.4-201ENST00000586196 166 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AC067852.4-201ENST00000590314 478 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 NRBF2P5-201ENST00000603087 788 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AL359999.1-201ENST00000604513 294 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 AL158801.5-201ENST00000623123 465 ntBASIC3.76□□□□□ -1.81
EBF3Q9H4W6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
EBF3Q9H4W6 NUP58P1-201ENST00000502546 1738 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC097714.1-201ENST00000511272 1647 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.72-201ENST00000362894 103 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 RNA5SP267-201ENST00000364893 126 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 CALM1P1-201ENST00000442082 433 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms