Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC064807.4-201ENST00000607201 407 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC138749.5-201ENST00000611461 208 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC013476.2-201ENST00000614456 459 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 AC116165.2-201ENST00000616705 206 ntBASIC3.72□□□□□ -1.81
USP44Q9H0E7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
USP44Q9H0E7 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP44Q9H0E7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 RNA5SP295-201ENST00000362655 121 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 RNU5E-8P-201ENST00000363502 116 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 Y_RNA.598-201ENST00000410480 95 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 Y_RNA.608-201ENST00000410647 95 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC091390.3-201ENST00000426478 338 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 VN1R108P-201ENST00000431580 830 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 MTCO2P16-201ENST00000436962 677 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AL049734.2-201ENST00000441066 616 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 NANOGNBP1-201ENST00000448444 480 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 USP9YP12-201ENST00000450481 570 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 RPL23AP14-201ENST00000468281 468 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC135721.1-201ENST00000497954 479 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC068657.1-201ENST00000520807 306 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AP001804.3-201ENST00000525146 880 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AP000857.1-201ENST00000532151 543 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 OR4T1P-201ENST00000554933 911 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC055876.1-202ENST00000567053 138 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC012414.6-201ENST00000568241 401 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AL451007.1-201ENST00000595491 289 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC012065.4-201ENST00000602445 679 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC121334.2-201ENST00000605387 271 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC093732.2-201ENST00000607950 274 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC007038.2-201ENST00000608095 740 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC004067.1-201ENST00000608733 700 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC135507.2-201ENST00000612443 309 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC090970.3-201ENST00000612566 866 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AL158063.1-201ENST00000615349 536 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC009159.1-201ENST00000618386 642 ntBASIC3.71□□□□□ -1.82
USP44Q9H0E7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP44Q9H0E7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USP44Q9H0E7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP44Q9H0E7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP44Q9H0E7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP44Q9H0E7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP44Q9H0E7 GNG5P1-201ENST00000255500 204 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 U3.4-201ENST00000363352 213 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 MIR19A-201ENST00000384878 82 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 MTCYBP36-201ENST00000404146 440 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 RNU2-62P-201ENST00000410868 191 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC096664.2-201ENST00000411843 406 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 RPL26P6-201ENST00000440913 438 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC140076.1-201ENST00000449897 361 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 HSPE1P6-201ENST00000479457 291 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP44Q9H0E7 RNU6-798P-201ENST00000516912 103 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 RN7SKP272-201ENST00000516988 232 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 IGKV2-23-201ENST00000518729 323 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC100870.1-201ENST00000522035 505 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC007115.1-201ENST00000546853 234 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 KC877982.1-201ENST00000602313 470 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 U73023.1-201ENST00000603134 700 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC015871.2-201ENST00000603605 948 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC027807.2-201ENST00000616099 408 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC012150.2-201ENST00000621300 544 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 AC010149.2-201ENST00000637608 315 ntBASIC3.7□□□□□ -1.82
USP44Q9H0E7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.7□□□□□ -1.82
USP44Q9H0E7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP44Q9H0E7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 RNU5A-8P-201ENST00000364102 114 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 RNU6-809P-201ENST00000384461 107 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 RPL21P3-201ENST00000395517 478 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 RPS20P2-201ENST00000402520 389 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms