Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RNA5SP242-201ENST00000364171 118 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RN7SKP15-201ENST00000364742 309 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RNU6-395P-201ENST00000365662 106 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RNA5SP118-201ENST00000410385 109 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RNA5SP38-201ENST00000410750 119 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 USP9YP6-201ENST00000413550 854 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC063979.1-201ENST00000415539 377 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 USP9YP9-201ENST00000429406 715 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 MTND1P2-201ENST00000430604 821 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RPL12P11-201ENST00000439970 501 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC144530.1-201ENST00000452862 555 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC023141.9-201ENST00000458734 412 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC116533.1-201ENST00000459748 321 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RPL21P41-201ENST00000459863 264 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RPL23AP62-201ENST00000463396 453 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RPS4XP1-201ENST00000482189 787 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC104136.1-201ENST00000512969 394 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 SUB1P1-201ENST00000524415 382 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC063950.1-201ENST00000552036 308 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AC020910.3-201ENST00000603701 874 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AP000907.4-201ENST00000604143 237 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AL627230.1-201ENST00000613077 211 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AL773545.4-201ENST00000637262 310 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 AL513478.4-201ENST00000641636 310 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 ZNF285B-201ENST00000561698 1767 ntBASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTDSP1Q9GZU7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 ASNSP3-201ENST00000451989 1306 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 CEP170P1-201ENST00000502249 4587 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AC021146.4-201ENST00000309229 279 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 RNU6-270P-201ENST00000364131 105 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 MIR143-201ENST00000385300 106 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 MIR888-201ENST00000401186 77 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AL606923.1-201ENST00000406616 190 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AC140479.3-201ENST00000418944 1126 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AL158156.1-201ENST00000422509 473 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 ATP5JP1-201ENST00000431631 322 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AC122718.1-201ENST00000439448 744 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 FAM133DP-201ENST00000464802 691 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 RN7SL184P-201ENST00000488308 297 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 BX510359.5-201ENST00000515651 304 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 MTND4P7-201ENST00000523876 130 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AC068135.2-201ENST00000569293 1028 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 MIR548AC-201ENST00000585049 88 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 uc_338.34-201ENST00000617467 174 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AP005264.7-201ENST00000625003 745 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 AL049767.1-202ENST00000637826 242 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.26□□□□□ -1.89
CTDSP1Q9GZU7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTDSP1Q9GZU7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTDSP1Q9GZU7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTDSP1Q9GZU7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTDSP1Q9GZU7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTDSP1Q9GZU7 RNU6-371P-201ENST00000364283 108 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms